I think you are contacting the wrong developers. The thing running on Ouya is
mupen64plus-ae [1].
But maybe you can try to switch to cached interpreter (please restart the rom
after you switched the mode), take a note what happens in this emulator mode
and send this information to the mupen64plus-ae guys.
Kind regards,
Sven
[1]
https://github.com/paulscode/mupen64plus-ae/issues