AME segmentation fault

[Tyler Park]

I am trying to run AME on files with > ~100000 sequences. However, I keep getting segmentation fault on specific inputs. I don't think size is the case since some of the files that finish without error have more regions than those getting seg fault.

Here is the message I am getting:

/var/spool/slurmd/job9205580/slurm_script: line 10: 18912 Segmentation fault     ~/meme/bin/ame -oc ~/hg38 -control hg38.shuffle.fa -bgformat 0 -scoring max -method ranksum hg38.1.52.1.fa ~/motif_databases/JASPAR/JASPAR_CORE_2016_vertebrates.meme

Thank you.