Make issue

[Jeff Luong]

Trying to install MEME, but running into an issue. Any help would be appreciated.

/bin/sed -e 's%@catalina.home@%%' -e 's%@version@%4.11.1%' -e 's%@site.url@%http://meme-suite.org%' -e 's%@site.services@%no%' -e 's%@site.DN@%%' -e 's%@site.contact@%%' -e 's%@developer.contact@%meme-...@uw.edu%' -e 's%@expiry@%4%' -e 's%@bin.dir@%/root/meme/bin%' -e 's%@etc.dir@%/root/meme/etc%' -e 's%@lib.dir@%/root/meme/lib%' -e 's%@db.dir@%/root/meme/db%' -e 's%@sendmail@%/usr/sbin/sendmail%' -e 's%@quota@%%' MemeSuite.properties.in > MemeSuite.properties

make  all-recursive

make[1]: Entering directory `/data/jeff/meme_4.11.1'

Making all in src

make[2]: Entering directory `/data/jeff/meme_4.11.1/src'

echo '#define MEME_DIR "/root/meme"' >dir.h

echo '#define ETC_DIR "/root/meme/etc" ' >> dir.h  

echo '#define BIN_DIR "/root/meme/bin" ' >> dir.h

echo '#define TEMP_DIR "" ' >> dir.h

make  all-recursive

make[3]: Entering directory `/data/jeff/meme_4.11.1/src'

Making all in filters

make[4]: Entering directory `/data/jeff/meme_4.11.1/src/filters'

Making all in purge

make[5]: Entering directory `/data/jeff/meme_4.11.1/src/filters/purge'

make[5]: Nothing to be done for `all'.

make[5]: Leaving directory `/data/jeff/meme_4.11.1/src/filters/purge'

Making all in dust

make[5]: Entering directory `/data/jeff/meme_4.11.1/src/filters/dust'

make[5]: Nothing to be done for `all'.

make[5]: Leaving directory `/data/jeff/meme_4.11.1/src/filters/dust'

make[5]: Entering directory `/data/jeff/meme_4.11.1/src/filters'

make[5]: Nothing to be done for `all-am'.

make[5]: Leaving directory `/data/jeff/meme_4.11.1/src/filters'

make[4]: Leaving directory `/data/jeff/meme_4.11.1/src/filters'

Making all in libxml2

make[4]: Entering directory `/data/jeff/meme_4.11.1/src/libxml2'

Making all in include

make[5]: Entering directory `/data/jeff/meme_4.11.1/src/libxml2/include'

Making all in .

make[6]: Entering directory `/data/jeff/meme_4.11.1/src/libxml2/include'

make[6]: Nothing to be done for `all-am'.

make[6]: Leaving directory `/data/jeff/meme_4.11.1/src/libxml2/include'

Making all in libxml

make[6]: Entering directory `/data/jeff/meme_4.11.1/src/libxml2/include/libxml'

make[6]: Nothing to be done for `all'.

make[6]: Leaving directory `/data/jeff/meme_4.11.1/src/libxml2/include/libxml'

make[5]: Leaving directory `/data/jeff/meme_4.11.1/src/libxml2/include'

Making all in .

make[5]: Entering directory `/data/jeff/meme_4.11.1/src/libxml2'

make[5]: Nothing to be done for `all-am'.

make[5]: Leaving directory `/data/jeff/meme_4.11.1/src/libxml2'

make[4]: Leaving directory `/data/jeff/meme_4.11.1/src/libxml2'

Making all in libxslt

make[4]: Entering directory `/data/jeff/meme_4.11.1/src/libxslt'

make[4]: Nothing to be done for `all'.

make[4]: Leaving directory `/data/jeff/meme_4.11.1/src/libxslt'

Making all in libexslt

make[4]: Entering directory `/data/jeff/meme_4.11.1/src/libexslt'

make[4]: Nothing to be done for `all'.

make[4]: Leaving directory `/data/jeff/meme_4.11.1/src/libexslt'

Making all in .

make[4]: Entering directory `/data/jeff/meme_4.11.1/src'

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-ceqlogo.lo -MD -MP -MF .deps/libcommon_la-ceqlogo.Tpo -c -o libcommon_la-ceqlogo.lo `test -f 'ceqlogo.c' || echo './'`ceqlogo.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-ceqlogo.lo -MD -MP -MF .deps/libcommon_la-ceqlogo.Tpo -c ceqlogo.c  -fPIC -DPIC -o .libs/libcommon_la-ceqlogo.o

ceqlogo.c: In function ‘EPS_tokens’:

ceqlogo.c:1042: warning: implicit declaration of function ‘log2’

ceqlogo.c:1042: warning: incompatible implicit declaration of built-in function ‘log2’

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-ceqlogo.lo -MD -MP -MF .deps/libcommon_la-ceqlogo.Tpo -c ceqlogo.c -o libcommon_la-ceqlogo.o >/dev/null 2>&1

mv -f .deps/libcommon_la-ceqlogo.Tpo .deps/libcommon_la-ceqlogo.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-cisml.lo -MD -MP -MF .deps/libcommon_la-cisml.Tpo -c -o libcommon_la-cisml.lo `test -f 'cisml.c' || echo './'`cisml.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-cisml.lo -MD -MP -MF .deps/libcommon_la-cisml.Tpo -c cisml.c  -fPIC -DPIC -o .libs/libcommon_la-cisml.o

cisml.c: In function ‘allocate_multi_pattern_match’:

cisml.c:964: error: ‘NAN’ undeclared (first use in this function)

cisml.c:964: error: (Each undeclared identifier is reported only once

cisml.c:964: error: for each function it appears in.)

make[4]: *** [libcommon_la-cisml.lo] Error 1

make[4]: Leaving directory `/data/jeff/meme_4.11.1/src'

make[3]: *** [all-recursive] Error 1

make[3]: Leaving directory `/data/jeff/meme_4.11.1/src'

make[2]: *** [all] Error 2

make[2]: Leaving directory `/data/jeff/meme_4.11.1/src'

make[1]: *** [all-recursive] Error 1

make[1]: Leaving directory `/data/jeff/meme_4.11.1'

make: *** [all] Error 2

[CharlesEGrant]

Hi Jeff,

The compiler is complaining that if can't find a definition for the preprocessor constant 'NAN'. This has been part of most distributions of 'math.h' for a while now. It may be that you are using an older version of the C compiler. Could you forward us a copy of the config.log file from the root directory of the MEME Suite distribution?

Charles

[Ryan Corces-Zimmerman]

I am also experiencing the same error using gcc version 4.8.1

I have uploaded my config.log file to http://web.stanford.edu/~mcorces/config.log

Any help would be greatly appreciated.

Thanks

-ryan

[CharlesEGrant]

Everything in your config.log looks fine. I was able to build MEME Suite 4.11.1 using GCC 4.8.1 with no problems on Red Enterprise Linux 6 (kernel 2.6.32) . Could you re-run 'make', capturing the output into a log file:

make &> make.log

and forward us a copy of the log?

Charles

[Ryan Corces-Zimmerman]

Hi Charles,

Thanks for your help.

I have reproduced the make output below and uploaded it here as well - http://web.stanford.edu/~mcorces/make.log

-ryan

/bin/sed -e 's%@catalina.home@%%' -e 's%@version@%4.11.1%' -e 's%@site.url@%http://meme-suite.org%' -e 's%@site.services@%no%' -e 's%@site.DN@%%' -e 's%@site.contact@%%' -e 's%@developer.contact@%meme-...@uw.edu%' -e 's%@expiry@%4%' -e 's%@bin.dir@%/home/mcorces/tools/meme/meme_4.11.1/bin%' -e 's%@etc.dir@%/home/mcorces/tools/meme/meme_4.11.1/etc%' -e 's%@lib.dir@%/home/mcorces/tools/meme/meme_4.11.1/lib%' -e 's%@db.dir@%/home/mcorces/tools/meme/meme_4.11.1/db%' -e 's%@sendmail@%/usr/lib/sendmail%' -e 's%@quota@%%' MemeSuite.properties.in > MemeSuite.properties

make  all-recursive

make[1]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1'

Making all in src

make[2]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src'

echo '#define MEME_DIR "/home/mcorces/tools/meme/meme_4.11.1"' >dir.h

echo '#define ETC_DIR "/home/mcorces/tools/meme/meme_4.11.1/etc" ' >> dir.h  

echo '#define BIN_DIR "/home/mcorces/tools/meme/meme_4.11.1/bin" ' >> dir.h

echo '#define TEMP_DIR "" ' >> dir.h

echo '#define REVISION "f26a4af60723490374bbb05f050f70f1f2976369"' > projrel.h

echo '#define ARCHIVE_DATE "Fri Jan 15 12:51:59 2016 -0800"' >> projrel.h

make  all-recursive

make[3]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src'

Making all in filters

make[4]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/filters'

Making all in purge

make[5]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/filters/purge'

depbase=`echo afnio.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT afnio.o -MD -MP -MF $depbase.Tpo -c -o afnio.o afnio.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo alphabet.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT alphabet.o -MD -MP -MF $depbase.Tpo -c -o alphabet.o alphabet.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo block.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT block.o -MD -MP -MF $depbase.Tpo -c -o block.o block.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo dheap.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT dheap.o -MD -MP -MF $depbase.Tpo -c -o dheap.o dheap.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo gblast.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT gblast.o -MD -MP -MF $depbase.Tpo -c -o gblast.o gblast.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo karlin.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT karlin.o -MD -MP -MF $depbase.Tpo -c -o karlin.o karlin.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo mheap.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT mheap.o -MD -MP -MF $depbase.Tpo -c -o mheap.o mheap.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo mlist.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT mlist.o -MD -MP -MF $depbase.Tpo -c -o mlist.o mlist.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo pairaln.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT pairaln.o -MD -MP -MF $depbase.Tpo -c -o pairaln.o pairaln.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo pmain.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT pmain.o -MD -MP -MF $depbase.Tpo -c -o pmain.o pmain.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo purge.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT purge.o -MD -MP -MF $depbase.Tpo -c -o purge.o purge.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo random.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT random.o -MD -MP -MF $depbase.Tpo -c -o random.o random.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo seqset.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT seqset.o -MD -MP -MF $depbase.Tpo -c -o seqset.o seqset.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo sequence.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT sequence.o -MD -MP -MF $depbase.Tpo -c -o sequence.o sequence.c &&\

mv -f $depbase.Tpo $depbase.Po

/bin/sh ../../../libtool  --tag=CC   --mode=link gcc  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3   -o purge afnio.o alphabet.o block.o dheap.o gblast.o karlin.o mheap.o mlist.o pairaln.o pmain.o purge.o random.o seqset.o sequence.o -lm -lz -lm 

libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o purge afnio.o alphabet.o block.o dheap.o gblast.o karlin.o mheap.o mlist.o pairaln.o pmain.o purge.o random.o seqset.o sequence.o  -lz -lm

make[5]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/filters/purge'

Making all in dust

make[5]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/filters/dust'

depbase=`echo tust.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT tust.o -MD -MP -MF $depbase.Tpo -c -o tust.o tust.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo dust.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT dust.o -MD -MP -MF $depbase.Tpo -c -o dust.o dust.c &&\

mv -f $depbase.Tpo $depbase.Po

depbase=`echo getfa.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\

gcc -DHAVE_CONFIG_H -I. -I../../..     -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT getfa.o -MD -MP -MF $depbase.Tpo -c -o getfa.o getfa.c &&\

mv -f $depbase.Tpo $depbase.Po

/bin/sh ../../../libtool  --tag=CC   --mode=link gcc  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3   -o dust tust.o dust.o getfa.o  -lz -lm 

libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o dust tust.o dust.o getfa.o  -lz -lm

make[5]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/filters/dust'

make[5]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/filters'

make[5]: Nothing to be done for `all-am'.

make[5]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/filters'

make[4]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/filters'

Making all in libxml2

make[4]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2'

Making all in include

make[5]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2/include'

Making all in .

make[6]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2/include'

make[6]: Nothing to be done for `all-am'.

make[6]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2/include'

Making all in libxml

make[6]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2/include/libxml'

make[6]: Nothing to be done for `all'.

make[6]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2/include/libxml'

make[5]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2/include'

Making all in .

make[5]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2'

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-chvalid.lo -MD -MP -MF .deps/libxml2_la-chvalid.Tpo -c -o libxml2_la-chvalid.lo `test -f 'chvalid.c' || echo './'`chvalid.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-chvalid.lo -MD -MP -MF .deps/libxml2_la-chvalid.Tpo -c chvalid.c  -fPIC -DPIC -o .libs/libxml2_la-chvalid.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-chvalid.lo -MD -MP -MF .deps/libxml2_la-chvalid.Tpo -c chvalid.c -o libxml2_la-chvalid.o >/dev/null 2>&1

mv -f .deps/libxml2_la-chvalid.Tpo .deps/libxml2_la-chvalid.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-debugXML.lo -MD -MP -MF .deps/libxml2_la-debugXML.Tpo -c -o libxml2_la-debugXML.lo `test -f 'debugXML.c' || echo './'`debugXML.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-debugXML.lo -MD -MP -MF .deps/libxml2_la-debugXML.Tpo -c debugXML.c  -fPIC -DPIC -o .libs/libxml2_la-debugXML.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-debugXML.lo -MD -MP -MF .deps/libxml2_la-debugXML.Tpo -c debugXML.c -o libxml2_la-debugXML.o >/dev/null 2>&1

mv -f .deps/libxml2_la-debugXML.Tpo .deps/libxml2_la-debugXML.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-dict.lo -MD -MP -MF .deps/libxml2_la-dict.Tpo -c -o libxml2_la-dict.lo `test -f 'dict.c' || echo './'`dict.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-dict.lo -MD -MP -MF .deps/libxml2_la-dict.Tpo -c dict.c  -fPIC -DPIC -o .libs/libxml2_la-dict.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-dict.lo -MD -MP -MF .deps/libxml2_la-dict.Tpo -c dict.c -o libxml2_la-dict.o >/dev/null 2>&1

mv -f .deps/libxml2_la-dict.Tpo .deps/libxml2_la-dict.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-encoding.lo -MD -MP -MF .deps/libxml2_la-encoding.Tpo -c -o libxml2_la-encoding.lo `test -f 'encoding.c' || echo './'`encoding.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-encoding.lo -MD -MP -MF .deps/libxml2_la-encoding.Tpo -c encoding.c  -fPIC -DPIC -o .libs/libxml2_la-encoding.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-encoding.lo -MD -MP -MF .deps/libxml2_la-encoding.Tpo -c encoding.c -o libxml2_la-encoding.o >/dev/null 2>&1

mv -f .deps/libxml2_la-encoding.Tpo .deps/libxml2_la-encoding.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-entities.lo -MD -MP -MF .deps/libxml2_la-entities.Tpo -c -o libxml2_la-entities.lo `test -f 'entities.c' || echo './'`entities.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-entities.lo -MD -MP -MF .deps/libxml2_la-entities.Tpo -c entities.c  -fPIC -DPIC -o .libs/libxml2_la-entities.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-entities.lo -MD -MP -MF .deps/libxml2_la-entities.Tpo -c entities.c -o libxml2_la-entities.o >/dev/null 2>&1

mv -f .deps/libxml2_la-entities.Tpo .deps/libxml2_la-entities.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-error.lo -MD -MP -MF .deps/libxml2_la-error.Tpo -c -o libxml2_la-error.lo `test -f 'error.c' || echo './'`error.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-error.lo -MD -MP -MF .deps/libxml2_la-error.Tpo -c error.c  -fPIC -DPIC -o .libs/libxml2_la-error.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-error.lo -MD -MP -MF .deps/libxml2_la-error.Tpo -c error.c -o libxml2_la-error.o >/dev/null 2>&1

mv -f .deps/libxml2_la-error.Tpo .deps/libxml2_la-error.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-globals.lo -MD -MP -MF .deps/libxml2_la-globals.Tpo -c -o libxml2_la-globals.lo `test -f 'globals.c' || echo './'`globals.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-globals.lo -MD -MP -MF .deps/libxml2_la-globals.Tpo -c globals.c  -fPIC -DPIC -o .libs/libxml2_la-globals.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-globals.lo -MD -MP -MF .deps/libxml2_la-globals.Tpo -c globals.c -o libxml2_la-globals.o >/dev/null 2>&1

mv -f .deps/libxml2_la-globals.Tpo .deps/libxml2_la-globals.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-hash.lo -MD -MP -MF .deps/libxml2_la-hash.Tpo -c -o libxml2_la-hash.lo `test -f 'hash.c' || echo './'`hash.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-hash.lo -MD -MP -MF .deps/libxml2_la-hash.Tpo -c hash.c  -fPIC -DPIC -o .libs/libxml2_la-hash.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-hash.lo -MD -MP -MF .deps/libxml2_la-hash.Tpo -c hash.c -o libxml2_la-hash.o >/dev/null 2>&1

mv -f .deps/libxml2_la-hash.Tpo .deps/libxml2_la-hash.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-HTMLparser.lo -MD -MP -MF .deps/libxml2_la-HTMLparser.Tpo -c -o libxml2_la-HTMLparser.lo `test -f 'HTMLparser.c' || echo './'`HTMLparser.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-HTMLparser.lo -MD -MP -MF .deps/libxml2_la-HTMLparser.Tpo -c HTMLparser.c  -fPIC -DPIC -o .libs/libxml2_la-HTMLparser.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-HTMLparser.lo -MD -MP -MF .deps/libxml2_la-HTMLparser.Tpo -c HTMLparser.c -o libxml2_la-HTMLparser.o >/dev/null 2>&1

mv -f .deps/libxml2_la-HTMLparser.Tpo .deps/libxml2_la-HTMLparser.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-HTMLtree.lo -MD -MP -MF .deps/libxml2_la-HTMLtree.Tpo -c -o libxml2_la-HTMLtree.lo `test -f 'HTMLtree.c' || echo './'`HTMLtree.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-HTMLtree.lo -MD -MP -MF .deps/libxml2_la-HTMLtree.Tpo -c HTMLtree.c  -fPIC -DPIC -o .libs/libxml2_la-HTMLtree.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-HTMLtree.lo -MD -MP -MF .deps/libxml2_la-HTMLtree.Tpo -c HTMLtree.c -o libxml2_la-HTMLtree.o >/dev/null 2>&1

mv -f .deps/libxml2_la-HTMLtree.Tpo .deps/libxml2_la-HTMLtree.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-list.lo -MD -MP -MF .deps/libxml2_la-list.Tpo -c -o libxml2_la-list.lo `test -f 'list.c' || echo './'`list.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-list.lo -MD -MP -MF .deps/libxml2_la-list.Tpo -c list.c  -fPIC -DPIC -o .libs/libxml2_la-list.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-list.lo -MD -MP -MF .deps/libxml2_la-list.Tpo -c list.c -o libxml2_la-list.o >/dev/null 2>&1

mv -f .deps/libxml2_la-list.Tpo .deps/libxml2_la-list.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-parserInternals.lo -MD -MP -MF .deps/libxml2_la-parserInternals.Tpo -c -o libxml2_la-parserInternals.lo `test -f 'parserInternals.c' || echo './'`parserInternals.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-parserInternals.lo -MD -MP -MF .deps/libxml2_la-parserInternals.Tpo -c parserInternals.c  -fPIC -DPIC -o .libs/libxml2_la-parserInternals.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-parserInternals.lo -MD -MP -MF .deps/libxml2_la-parserInternals.Tpo -c parserInternals.c -o libxml2_la-parserInternals.o >/dev/null 2>&1

mv -f .deps/libxml2_la-parserInternals.Tpo .deps/libxml2_la-parserInternals.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-parser.lo -MD -MP -MF .deps/libxml2_la-parser.Tpo -c -o libxml2_la-parser.lo `test -f 'parser.c' || echo './'`parser.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-parser.lo -MD -MP -MF .deps/libxml2_la-parser.Tpo -c parser.c  -fPIC -DPIC -o .libs/libxml2_la-parser.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-parser.lo -MD -MP -MF .deps/libxml2_la-parser.Tpo -c parser.c -o libxml2_la-parser.o >/dev/null 2>&1

mv -f .deps/libxml2_la-parser.Tpo .deps/libxml2_la-parser.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-pattern.lo -MD -MP -MF .deps/libxml2_la-pattern.Tpo -c -o libxml2_la-pattern.lo `test -f 'pattern.c' || echo './'`pattern.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-pattern.lo -MD -MP -MF .deps/libxml2_la-pattern.Tpo -c pattern.c  -fPIC -DPIC -o .libs/libxml2_la-pattern.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-pattern.lo -MD -MP -MF .deps/libxml2_la-pattern.Tpo -c pattern.c -o libxml2_la-pattern.o >/dev/null 2>&1

mv -f .deps/libxml2_la-pattern.Tpo .deps/libxml2_la-pattern.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-relaxng.lo -MD -MP -MF .deps/libxml2_la-relaxng.Tpo -c -o libxml2_la-relaxng.lo `test -f 'relaxng.c' || echo './'`relaxng.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-relaxng.lo -MD -MP -MF .deps/libxml2_la-relaxng.Tpo -c relaxng.c  -fPIC -DPIC -o .libs/libxml2_la-relaxng.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-relaxng.lo -MD -MP -MF .deps/libxml2_la-relaxng.Tpo -c relaxng.c -o libxml2_la-relaxng.o >/dev/null 2>&1

mv -f .deps/libxml2_la-relaxng.Tpo .deps/libxml2_la-relaxng.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-tree.lo -MD -MP -MF .deps/libxml2_la-tree.Tpo -c -o libxml2_la-tree.lo `test -f 'tree.c' || echo './'`tree.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-tree.lo -MD -MP -MF .deps/libxml2_la-tree.Tpo -c tree.c  -fPIC -DPIC -o .libs/libxml2_la-tree.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-tree.lo -MD -MP -MF .deps/libxml2_la-tree.Tpo -c tree.c -o libxml2_la-tree.o >/dev/null 2>&1

mv -f .deps/libxml2_la-tree.Tpo .deps/libxml2_la-tree.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-SAX2.lo -MD -MP -MF .deps/libxml2_la-SAX2.Tpo -c -o libxml2_la-SAX2.lo `test -f 'SAX2.c' || echo './'`SAX2.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-SAX2.lo -MD -MP -MF .deps/libxml2_la-SAX2.Tpo -c SAX2.c  -fPIC -DPIC -o .libs/libxml2_la-SAX2.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-SAX2.lo -MD -MP -MF .deps/libxml2_la-SAX2.Tpo -c SAX2.c -o libxml2_la-SAX2.o >/dev/null 2>&1

mv -f .deps/libxml2_la-SAX2.Tpo .deps/libxml2_la-SAX2.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-threads.lo -MD -MP -MF .deps/libxml2_la-threads.Tpo -c -o libxml2_la-threads.lo `test -f 'threads.c' || echo './'`threads.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-threads.lo -MD -MP -MF .deps/libxml2_la-threads.Tpo -c threads.c  -fPIC -DPIC -o .libs/libxml2_la-threads.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-threads.lo -MD -MP -MF .deps/libxml2_la-threads.Tpo -c threads.c -o libxml2_la-threads.o >/dev/null 2>&1

mv -f .deps/libxml2_la-threads.Tpo .deps/libxml2_la-threads.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-uri.lo -MD -MP -MF .deps/libxml2_la-uri.Tpo -c -o libxml2_la-uri.lo `test -f 'uri.c' || echo './'`uri.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-uri.lo -MD -MP -MF .deps/libxml2_la-uri.Tpo -c uri.c  -fPIC -DPIC -o .libs/libxml2_la-uri.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-uri.lo -MD -MP -MF .deps/libxml2_la-uri.Tpo -c uri.c -o libxml2_la-uri.o >/dev/null 2>&1

mv -f .deps/libxml2_la-uri.Tpo .deps/libxml2_la-uri.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-valid.lo -MD -MP -MF .deps/libxml2_la-valid.Tpo -c -o libxml2_la-valid.lo `test -f 'valid.c' || echo './'`valid.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-valid.lo -MD -MP -MF .deps/libxml2_la-valid.Tpo -c valid.c  -fPIC -DPIC -o .libs/libxml2_la-valid.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-valid.lo -MD -MP -MF .deps/libxml2_la-valid.Tpo -c valid.c -o libxml2_la-valid.o >/dev/null 2>&1

mv -f .deps/libxml2_la-valid.Tpo .deps/libxml2_la-valid.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlIO.lo -MD -MP -MF .deps/libxml2_la-xmlIO.Tpo -c -o libxml2_la-xmlIO.lo `test -f 'xmlIO.c' || echo './'`xmlIO.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlIO.lo -MD -MP -MF .deps/libxml2_la-xmlIO.Tpo -c xmlIO.c  -fPIC -DPIC -o .libs/libxml2_la-xmlIO.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlIO.lo -MD -MP -MF .deps/libxml2_la-xmlIO.Tpo -c xmlIO.c -o libxml2_la-xmlIO.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlIO.Tpo .deps/libxml2_la-xmlIO.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlreader.lo -MD -MP -MF .deps/libxml2_la-xmlreader.Tpo -c -o libxml2_la-xmlreader.lo `test -f 'xmlreader.c' || echo './'`xmlreader.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlreader.lo -MD -MP -MF .deps/libxml2_la-xmlreader.Tpo -c xmlreader.c  -fPIC -DPIC -o .libs/libxml2_la-xmlreader.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlreader.lo -MD -MP -MF .deps/libxml2_la-xmlreader.Tpo -c xmlreader.c -o libxml2_la-xmlreader.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlreader.Tpo .deps/libxml2_la-xmlreader.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlregexp.lo -MD -MP -MF .deps/libxml2_la-xmlregexp.Tpo -c -o libxml2_la-xmlregexp.lo `test -f 'xmlregexp.c' || echo './'`xmlregexp.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlregexp.lo -MD -MP -MF .deps/libxml2_la-xmlregexp.Tpo -c xmlregexp.c  -fPIC -DPIC -o .libs/libxml2_la-xmlregexp.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlregexp.lo -MD -MP -MF .deps/libxml2_la-xmlregexp.Tpo -c xmlregexp.c -o libxml2_la-xmlregexp.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlregexp.Tpo .deps/libxml2_la-xmlregexp.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlsave.lo -MD -MP -MF .deps/libxml2_la-xmlsave.Tpo -c -o libxml2_la-xmlsave.lo `test -f 'xmlsave.c' || echo './'`xmlsave.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlsave.lo -MD -MP -MF .deps/libxml2_la-xmlsave.Tpo -c xmlsave.c  -fPIC -DPIC -o .libs/libxml2_la-xmlsave.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlsave.lo -MD -MP -MF .deps/libxml2_la-xmlsave.Tpo -c xmlsave.c -o libxml2_la-xmlsave.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlsave.Tpo .deps/libxml2_la-xmlsave.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlstring.lo -MD -MP -MF .deps/libxml2_la-xmlstring.Tpo -c -o libxml2_la-xmlstring.lo `test -f 'xmlstring.c' || echo './'`xmlstring.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlstring.lo -MD -MP -MF .deps/libxml2_la-xmlstring.Tpo -c xmlstring.c  -fPIC -DPIC -o .libs/libxml2_la-xmlstring.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlstring.lo -MD -MP -MF .deps/libxml2_la-xmlstring.Tpo -c xmlstring.c -o libxml2_la-xmlstring.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlstring.Tpo .deps/libxml2_la-xmlstring.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlschemas.lo -MD -MP -MF .deps/libxml2_la-xmlschemas.Tpo -c -o libxml2_la-xmlschemas.lo `test -f 'xmlschemas.c' || echo './'`xmlschemas.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlschemas.lo -MD -MP -MF .deps/libxml2_la-xmlschemas.Tpo -c xmlschemas.c  -fPIC -DPIC -o .libs/libxml2_la-xmlschemas.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlschemas.lo -MD -MP -MF .deps/libxml2_la-xmlschemas.Tpo -c xmlschemas.c -o libxml2_la-xmlschemas.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlschemas.Tpo .deps/libxml2_la-xmlschemas.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlschemastypes.lo -MD -MP -MF .deps/libxml2_la-xmlschemastypes.Tpo -c -o libxml2_la-xmlschemastypes.lo `test -f 'xmlschemastypes.c' || echo './'`xmlschemastypes.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlschemastypes.lo -MD -MP -MF .deps/libxml2_la-xmlschemastypes.Tpo -c xmlschemastypes.c  -fPIC -DPIC -o .libs/libxml2_la-xmlschemastypes.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlschemastypes.lo -MD -MP -MF .deps/libxml2_la-xmlschemastypes.Tpo -c xmlschemastypes.c -o libxml2_la-xmlschemastypes.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlschemastypes.Tpo .deps/libxml2_la-xmlschemastypes.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlunicode.lo -MD -MP -MF .deps/libxml2_la-xmlunicode.Tpo -c -o libxml2_la-xmlunicode.lo `test -f 'xmlunicode.c' || echo './'`xmlunicode.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlunicode.lo -MD -MP -MF .deps/libxml2_la-xmlunicode.Tpo -c xmlunicode.c  -fPIC -DPIC -o .libs/libxml2_la-xmlunicode.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlunicode.lo -MD -MP -MF .deps/libxml2_la-xmlunicode.Tpo -c xmlunicode.c -o libxml2_la-xmlunicode.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlunicode.Tpo .deps/libxml2_la-xmlunicode.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlwriter.lo -MD -MP -MF .deps/libxml2_la-xmlwriter.Tpo -c -o libxml2_la-xmlwriter.lo `test -f 'xmlwriter.c' || echo './'`xmlwriter.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlwriter.lo -MD -MP -MF .deps/libxml2_la-xmlwriter.Tpo -c xmlwriter.c  -fPIC -DPIC -o .libs/libxml2_la-xmlwriter.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlwriter.lo -MD -MP -MF .deps/libxml2_la-xmlwriter.Tpo -c xmlwriter.c -o libxml2_la-xmlwriter.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlwriter.Tpo .deps/libxml2_la-xmlwriter.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xmlmemory.lo -MD -MP -MF .deps/libxml2_la-xmlmemory.Tpo -c -o libxml2_la-xmlmemory.lo `test -f 'xmlmemory.c' || echo './'`xmlmemory.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlmemory.lo -MD -MP -MF .deps/libxml2_la-xmlmemory.Tpo -c xmlmemory.c  -fPIC -DPIC -o .libs/libxml2_la-xmlmemory.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xmlmemory.lo -MD -MP -MF .deps/libxml2_la-xmlmemory.Tpo -c xmlmemory.c -o libxml2_la-xmlmemory.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xmlmemory.Tpo .deps/libxml2_la-xmlmemory.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..  -I. -I./include    -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxml2_la-xpath.lo -MD -MP -MF .deps/libxml2_la-xpath.Tpo -c -o libxml2_la-xpath.lo `test -f 'xpath.c' || echo './'`xpath.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xpath.lo -MD -MP -MF .deps/libxml2_la-xpath.Tpo -c xpath.c  -fPIC -DPIC -o .libs/libxml2_la-xpath.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxml2_la-xpath.lo -MD -MP -MF .deps/libxml2_la-xpath.Tpo -c xpath.c -o libxml2_la-xpath.o >/dev/null 2>&1

mv -f .deps/libxml2_la-xpath.Tpo .deps/libxml2_la-xpath.Plo

/bin/sh ../../libtool  --tag=CC   --mode=link gcc   -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3   -o libxml2.la  libxml2_la-chvalid.lo libxml2_la-debugXML.lo libxml2_la-dict.lo libxml2_la-encoding.lo libxml2_la-entities.lo libxml2_la-error.lo libxml2_la-globals.lo libxml2_la-hash.lo libxml2_la-HTMLparser.lo libxml2_la-HTMLtree.lo libxml2_la-list.lo libxml2_la-parserInternals.lo libxml2_la-parser.lo libxml2_la-pattern.lo libxml2_la-relaxng.lo libxml2_la-tree.lo libxml2_la-SAX2.lo libxml2_la-threads.lo libxml2_la-uri.lo libxml2_la-valid.lo libxml2_la-xmlIO.lo libxml2_la-xmlreader.lo libxml2_la-xmlregexp.lo libxml2_la-xmlsave.lo libxml2_la-xmlstring.lo libxml2_la-xmlschemas.lo libxml2_la-xmlschemastypes.lo libxml2_la-xmlunicode.lo libxml2_la-xmlwriter.lo libxml2_la-xmlmemory.lo libxml2_la-xpath.lo   -lz -lm 

libtool: link: ar cru .libs/libxml2.a .libs/libxml2_la-chvalid.o .libs/libxml2_la-debugXML.o .libs/libxml2_la-dict.o .libs/libxml2_la-encoding.o .libs/libxml2_la-entities.o .libs/libxml2_la-error.o .libs/libxml2_la-globals.o .libs/libxml2_la-hash.o .libs/libxml2_la-HTMLparser.o .libs/libxml2_la-HTMLtree.o .libs/libxml2_la-list.o .libs/libxml2_la-parserInternals.o .libs/libxml2_la-parser.o .libs/libxml2_la-pattern.o .libs/libxml2_la-relaxng.o .libs/libxml2_la-tree.o .libs/libxml2_la-SAX2.o .libs/libxml2_la-threads.o .libs/libxml2_la-uri.o .libs/libxml2_la-valid.o .libs/libxml2_la-xmlIO.o .libs/libxml2_la-xmlreader.o .libs/libxml2_la-xmlregexp.o .libs/libxml2_la-xmlsave.o .libs/libxml2_la-xmlstring.o .libs/libxml2_la-xmlschemas.o .libs/libxml2_la-xmlschemastypes.o .libs/libxml2_la-xmlunicode.o .libs/libxml2_la-xmlwriter.o .libs/libxml2_la-xmlmemory.o .libs/libxml2_la-xpath.o 

libtool: link: ranlib .libs/libxml2.a

libtool: link: ( cd ".libs" && rm -f "libxml2.la" && ln -s "../libxml2.la" "libxml2.la" )

make[5]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2'

make[4]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxml2'

Making all in libxslt

make[4]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxslt'

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-attributes.lo -MD -MP -MF .deps/libxslt_la-attributes.Tpo -c -o libxslt_la-attributes.lo `test -f 'attributes.c' || echo './'`attributes.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-attributes.lo -MD -MP -MF .deps/libxslt_la-attributes.Tpo -c attributes.c  -fPIC -DPIC -o .libs/libxslt_la-attributes.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-attributes.lo -MD -MP -MF .deps/libxslt_la-attributes.Tpo -c attributes.c -o libxslt_la-attributes.o >/dev/null 2>&1

mv -f .deps/libxslt_la-attributes.Tpo .deps/libxslt_la-attributes.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-attrvt.lo -MD -MP -MF .deps/libxslt_la-attrvt.Tpo -c -o libxslt_la-attrvt.lo `test -f 'attrvt.c' || echo './'`attrvt.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-attrvt.lo -MD -MP -MF .deps/libxslt_la-attrvt.Tpo -c attrvt.c  -fPIC -DPIC -o .libs/libxslt_la-attrvt.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-attrvt.lo -MD -MP -MF .deps/libxslt_la-attrvt.Tpo -c attrvt.c -o libxslt_la-attrvt.o >/dev/null 2>&1

mv -f .deps/libxslt_la-attrvt.Tpo .deps/libxslt_la-attrvt.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-documents.lo -MD -MP -MF .deps/libxslt_la-documents.Tpo -c -o libxslt_la-documents.lo `test -f 'documents.c' || echo './'`documents.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-documents.lo -MD -MP -MF .deps/libxslt_la-documents.Tpo -c documents.c  -fPIC -DPIC -o .libs/libxslt_la-documents.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-documents.lo -MD -MP -MF .deps/libxslt_la-documents.Tpo -c documents.c -o libxslt_la-documents.o >/dev/null 2>&1

mv -f .deps/libxslt_la-documents.Tpo .deps/libxslt_la-documents.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-extensions.lo -MD -MP -MF .deps/libxslt_la-extensions.Tpo -c -o libxslt_la-extensions.lo `test -f 'extensions.c' || echo './'`extensions.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-extensions.lo -MD -MP -MF .deps/libxslt_la-extensions.Tpo -c extensions.c  -fPIC -DPIC -o .libs/libxslt_la-extensions.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-extensions.lo -MD -MP -MF .deps/libxslt_la-extensions.Tpo -c extensions.c -o libxslt_la-extensions.o >/dev/null 2>&1

mv -f .deps/libxslt_la-extensions.Tpo .deps/libxslt_la-extensions.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-extra.lo -MD -MP -MF .deps/libxslt_la-extra.Tpo -c -o libxslt_la-extra.lo `test -f 'extra.c' || echo './'`extra.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-extra.lo -MD -MP -MF .deps/libxslt_la-extra.Tpo -c extra.c  -fPIC -DPIC -o .libs/libxslt_la-extra.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-extra.lo -MD -MP -MF .deps/libxslt_la-extra.Tpo -c extra.c -o libxslt_la-extra.o >/dev/null 2>&1

mv -f .deps/libxslt_la-extra.Tpo .deps/libxslt_la-extra.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-functions.lo -MD -MP -MF .deps/libxslt_la-functions.Tpo -c -o libxslt_la-functions.lo `test -f 'functions.c' || echo './'`functions.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-functions.lo -MD -MP -MF .deps/libxslt_la-functions.Tpo -c functions.c  -fPIC -DPIC -o .libs/libxslt_la-functions.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-functions.lo -MD -MP -MF .deps/libxslt_la-functions.Tpo -c functions.c -o libxslt_la-functions.o >/dev/null 2>&1

mv -f .deps/libxslt_la-functions.Tpo .deps/libxslt_la-functions.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-imports.lo -MD -MP -MF .deps/libxslt_la-imports.Tpo -c -o libxslt_la-imports.lo `test -f 'imports.c' || echo './'`imports.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-imports.lo -MD -MP -MF .deps/libxslt_la-imports.Tpo -c imports.c  -fPIC -DPIC -o .libs/libxslt_la-imports.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-imports.lo -MD -MP -MF .deps/libxslt_la-imports.Tpo -c imports.c -o libxslt_la-imports.o >/dev/null 2>&1

mv -f .deps/libxslt_la-imports.Tpo .deps/libxslt_la-imports.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-keys.lo -MD -MP -MF .deps/libxslt_la-keys.Tpo -c -o libxslt_la-keys.lo `test -f 'keys.c' || echo './'`keys.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-keys.lo -MD -MP -MF .deps/libxslt_la-keys.Tpo -c keys.c  -fPIC -DPIC -o .libs/libxslt_la-keys.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-keys.lo -MD -MP -MF .deps/libxslt_la-keys.Tpo -c keys.c -o libxslt_la-keys.o >/dev/null 2>&1

mv -f .deps/libxslt_la-keys.Tpo .deps/libxslt_la-keys.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-numbers.lo -MD -MP -MF .deps/libxslt_la-numbers.Tpo -c -o libxslt_la-numbers.lo `test -f 'numbers.c' || echo './'`numbers.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-numbers.lo -MD -MP -MF .deps/libxslt_la-numbers.Tpo -c numbers.c  -fPIC -DPIC -o .libs/libxslt_la-numbers.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-numbers.lo -MD -MP -MF .deps/libxslt_la-numbers.Tpo -c numbers.c -o libxslt_la-numbers.o >/dev/null 2>&1

mv -f .deps/libxslt_la-numbers.Tpo .deps/libxslt_la-numbers.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-namespaces.lo -MD -MP -MF .deps/libxslt_la-namespaces.Tpo -c -o libxslt_la-namespaces.lo `test -f 'namespaces.c' || echo './'`namespaces.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-namespaces.lo -MD -MP -MF .deps/libxslt_la-namespaces.Tpo -c namespaces.c  -fPIC -DPIC -o .libs/libxslt_la-namespaces.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-namespaces.lo -MD -MP -MF .deps/libxslt_la-namespaces.Tpo -c namespaces.c -o libxslt_la-namespaces.o >/dev/null 2>&1

mv -f .deps/libxslt_la-namespaces.Tpo .deps/libxslt_la-namespaces.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-pattern.lo -MD -MP -MF .deps/libxslt_la-pattern.Tpo -c -o libxslt_la-pattern.lo `test -f 'pattern.c' || echo './'`pattern.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-pattern.lo -MD -MP -MF .deps/libxslt_la-pattern.Tpo -c pattern.c  -fPIC -DPIC -o .libs/libxslt_la-pattern.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-pattern.lo -MD -MP -MF .deps/libxslt_la-pattern.Tpo -c pattern.c -o libxslt_la-pattern.o >/dev/null 2>&1

mv -f .deps/libxslt_la-pattern.Tpo .deps/libxslt_la-pattern.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-preproc.lo -MD -MP -MF .deps/libxslt_la-preproc.Tpo -c -o libxslt_la-preproc.lo `test -f 'preproc.c' || echo './'`preproc.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-preproc.lo -MD -MP -MF .deps/libxslt_la-preproc.Tpo -c preproc.c  -fPIC -DPIC -o .libs/libxslt_la-preproc.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-preproc.lo -MD -MP -MF .deps/libxslt_la-preproc.Tpo -c preproc.c -o libxslt_la-preproc.o >/dev/null 2>&1

mv -f .deps/libxslt_la-preproc.Tpo .deps/libxslt_la-preproc.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-security.lo -MD -MP -MF .deps/libxslt_la-security.Tpo -c -o libxslt_la-security.lo `test -f 'security.c' || echo './'`security.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-security.lo -MD -MP -MF .deps/libxslt_la-security.Tpo -c security.c  -fPIC -DPIC -o .libs/libxslt_la-security.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-security.lo -MD -MP -MF .deps/libxslt_la-security.Tpo -c security.c -o libxslt_la-security.o >/dev/null 2>&1

mv -f .deps/libxslt_la-security.Tpo .deps/libxslt_la-security.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-templates.lo -MD -MP -MF .deps/libxslt_la-templates.Tpo -c -o libxslt_la-templates.lo `test -f 'templates.c' || echo './'`templates.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-templates.lo -MD -MP -MF .deps/libxslt_la-templates.Tpo -c templates.c  -fPIC -DPIC -o .libs/libxslt_la-templates.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-templates.lo -MD -MP -MF .deps/libxslt_la-templates.Tpo -c templates.c -o libxslt_la-templates.o >/dev/null 2>&1

mv -f .deps/libxslt_la-templates.Tpo .deps/libxslt_la-templates.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-transform.lo -MD -MP -MF .deps/libxslt_la-transform.Tpo -c -o libxslt_la-transform.lo `test -f 'transform.c' || echo './'`transform.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-transform.lo -MD -MP -MF .deps/libxslt_la-transform.Tpo -c transform.c  -fPIC -DPIC -o .libs/libxslt_la-transform.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-transform.lo -MD -MP -MF .deps/libxslt_la-transform.Tpo -c transform.c -o libxslt_la-transform.o >/dev/null 2>&1

mv -f .deps/libxslt_la-transform.Tpo .deps/libxslt_la-transform.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-variables.lo -MD -MP -MF .deps/libxslt_la-variables.Tpo -c -o libxslt_la-variables.lo `test -f 'variables.c' || echo './'`variables.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-variables.lo -MD -MP -MF .deps/libxslt_la-variables.Tpo -c variables.c  -fPIC -DPIC -o .libs/libxslt_la-variables.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-variables.lo -MD -MP -MF .deps/libxslt_la-variables.Tpo -c variables.c -o libxslt_la-variables.o >/dev/null 2>&1

mv -f .deps/libxslt_la-variables.Tpo .deps/libxslt_la-variables.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-xslt.lo -MD -MP -MF .deps/libxslt_la-xslt.Tpo -c -o libxslt_la-xslt.lo `test -f 'xslt.c' || echo './'`xslt.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-xslt.lo -MD -MP -MF .deps/libxslt_la-xslt.Tpo -c xslt.c  -fPIC -DPIC -o .libs/libxslt_la-xslt.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-xslt.lo -MD -MP -MF .deps/libxslt_la-xslt.Tpo -c xslt.c -o libxslt_la-xslt.o >/dev/null 2>&1

mv -f .deps/libxslt_la-xslt.Tpo .deps/libxslt_la-xslt.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-xsltlocale.lo -MD -MP -MF .deps/libxslt_la-xsltlocale.Tpo -c -o libxslt_la-xsltlocale.lo `test -f 'xsltlocale.c' || echo './'`xsltlocale.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-xsltlocale.lo -MD -MP -MF .deps/libxslt_la-xsltlocale.Tpo -c xsltlocale.c  -fPIC -DPIC -o .libs/libxslt_la-xsltlocale.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-xsltlocale.lo -MD -MP -MF .deps/libxslt_la-xsltlocale.Tpo -c xsltlocale.c -o libxslt_la-xsltlocale.o >/dev/null 2>&1

mv -f .deps/libxslt_la-xsltlocale.Tpo .deps/libxslt_la-xsltlocale.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libxslt_la-xsltutils.lo -MD -MP -MF .deps/libxslt_la-xsltutils.Tpo -c -o libxslt_la-xsltutils.lo `test -f 'xsltutils.c' || echo './'`xsltutils.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-xsltutils.lo -MD -MP -MF .deps/libxslt_la-xsltutils.Tpo -c xsltutils.c  -fPIC -DPIC -o .libs/libxslt_la-xsltutils.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libxslt_la-xsltutils.lo -MD -MP -MF .deps/libxslt_la-xsltutils.Tpo -c xsltutils.c -o libxslt_la-xsltutils.o >/dev/null 2>&1

mv -f .deps/libxslt_la-xsltutils.Tpo .deps/libxslt_la-xsltutils.Plo

/bin/sh ../../libtool  --tag=CC   --mode=link gcc  -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3   -o libxslt.la  libxslt_la-attributes.lo libxslt_la-attrvt.lo libxslt_la-documents.lo libxslt_la-extensions.lo libxslt_la-extra.lo libxslt_la-functions.lo libxslt_la-imports.lo libxslt_la-keys.lo libxslt_la-numbers.lo libxslt_la-namespaces.lo libxslt_la-pattern.lo libxslt_la-preproc.lo libxslt_la-security.lo libxslt_la-templates.lo libxslt_la-transform.lo libxslt_la-variables.lo libxslt_la-xslt.lo libxslt_la-xsltlocale.lo libxslt_la-xsltutils.lo ../../src/libxml2/libxml2.la -lz -lm 

libtool: link: (cd .libs/libxslt.lax/libxml2.a && ar x "/home/mcorces/tools/meme_4.11.1/src/libxslt/../../src/libxml2/.libs/libxml2.a")

libtool: link: ar cru .libs/libxslt.a .libs/libxslt_la-attributes.o .libs/libxslt_la-attrvt.o .libs/libxslt_la-documents.o .libs/libxslt_la-extensions.o .libs/libxslt_la-extra.o .libs/libxslt_la-functions.o .libs/libxslt_la-imports.o .libs/libxslt_la-keys.o .libs/libxslt_la-numbers.o .libs/libxslt_la-namespaces.o .libs/libxslt_la-pattern.o .libs/libxslt_la-preproc.o .libs/libxslt_la-security.o .libs/libxslt_la-templates.o .libs/libxslt_la-transform.o .libs/libxslt_la-variables.o .libs/libxslt_la-xslt.o .libs/libxslt_la-xsltlocale.o .libs/libxslt_la-xsltutils.o   .libs/libxslt.lax/libxml2.a/libxml2_la-HTMLparser.o .libs/libxslt.lax/libxml2.a/libxml2_la-HTMLtree.o .libs/libxslt.lax/libxml2.a/libxml2_la-SAX2.o .libs/libxslt.lax/libxml2.a/libxml2_la-chvalid.o .libs/libxslt.lax/libxml2.a/libxml2_la-debugXML.o .libs/libxslt.lax/libxml2.a/libxml2_la-dict.o .libs/libxslt.lax/libxml2.a/libxml2_la-encoding.o .libs/libxslt.lax/libxml2.a/libxml2_la-entities.o .libs/libxslt.lax/libxml2.a/libxml2_la-error.o .libs/libxslt.lax/libxml2.a/libxml2_la-globals.o .libs/libxslt.lax/libxml2.a/libxml2_la-hash.o .libs/libxslt.lax/libxml2.a/libxml2_la-list.o .libs/libxslt.lax/libxml2.a/libxml2_la-parser.o .libs/libxslt.lax/libxml2.a/libxml2_la-parserInternals.o .libs/libxslt.lax/libxml2.a/libxml2_la-pattern.o .libs/libxslt.lax/libxml2.a/libxml2_la-relaxng.o .libs/libxslt.lax/libxml2.a/libxml2_la-threads.o .libs/libxslt.lax/libxml2.a/libxml2_la-tree.o .libs/libxslt.lax/libxml2.a/libxml2_la-uri.o .libs/libxslt.lax/libxml2.a/libxml2_la-valid.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlIO.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlmemory.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlreader.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlregexp.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlsave.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlschemas.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlschemastypes.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlstring.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlunicode.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlwriter.o .libs/libxslt.lax/libxml2.a/libxml2_la-xpath.o 

libtool: link: ranlib .libs/libxslt.a

libtool: link: rm -fr .libs/libxslt.lax

libtool: link: ( cd ".libs" && rm -f "libxslt.la" && ln -s "../libxslt.la" "libxslt.la" )

make[4]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libxslt'

Making all in libexslt

make[4]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libexslt'

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libexslt_la-common.lo -MD -MP -MF .deps/libexslt_la-common.Tpo -c -o libexslt_la-common.lo `test -f 'common.c' || echo './'`common.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-common.lo -MD -MP -MF .deps/libexslt_la-common.Tpo -c common.c  -fPIC -DPIC -o .libs/libexslt_la-common.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-common.lo -MD -MP -MF .deps/libexslt_la-common.Tpo -c common.c -o libexslt_la-common.o >/dev/null 2>&1

mv -f .deps/libexslt_la-common.Tpo .deps/libexslt_la-common.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libexslt_la-date.lo -MD -MP -MF .deps/libexslt_la-date.Tpo -c -o libexslt_la-date.lo `test -f 'date.c' || echo './'`date.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-date.lo -MD -MP -MF .deps/libexslt_la-date.Tpo -c date.c  -fPIC -DPIC -o .libs/libexslt_la-date.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-date.lo -MD -MP -MF .deps/libexslt_la-date.Tpo -c date.c -o libexslt_la-date.o >/dev/null 2>&1

mv -f .deps/libexslt_la-date.Tpo .deps/libexslt_la-date.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libexslt_la-dynamic.lo -MD -MP -MF .deps/libexslt_la-dynamic.Tpo -c -o libexslt_la-dynamic.lo `test -f 'dynamic.c' || echo './'`dynamic.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-dynamic.lo -MD -MP -MF .deps/libexslt_la-dynamic.Tpo -c dynamic.c  -fPIC -DPIC -o .libs/libexslt_la-dynamic.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-dynamic.lo -MD -MP -MF .deps/libexslt_la-dynamic.Tpo -c dynamic.c -o libexslt_la-dynamic.o >/dev/null 2>&1

mv -f .deps/libexslt_la-dynamic.Tpo .deps/libexslt_la-dynamic.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libexslt_la-exslt.lo -MD -MP -MF .deps/libexslt_la-exslt.Tpo -c -o libexslt_la-exslt.lo `test -f 'exslt.c' || echo './'`exslt.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-exslt.lo -MD -MP -MF .deps/libexslt_la-exslt.Tpo -c exslt.c  -fPIC -DPIC -o .libs/libexslt_la-exslt.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-exslt.lo -MD -MP -MF .deps/libexslt_la-exslt.Tpo -c exslt.c -o libexslt_la-exslt.o >/dev/null 2>&1

mv -f .deps/libexslt_la-exslt.Tpo .deps/libexslt_la-exslt.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libexslt_la-functions.lo -MD -MP -MF .deps/libexslt_la-functions.Tpo -c -o libexslt_la-functions.lo `test -f 'functions.c' || echo './'`functions.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-functions.lo -MD -MP -MF .deps/libexslt_la-functions.Tpo -c functions.c  -fPIC -DPIC -o .libs/libexslt_la-functions.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-functions.lo -MD -MP -MF .deps/libexslt_la-functions.Tpo -c functions.c -o libexslt_la-functions.o >/dev/null 2>&1

mv -f .deps/libexslt_la-functions.Tpo .deps/libexslt_la-functions.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libexslt_la-math.lo -MD -MP -MF .deps/libexslt_la-math.Tpo -c -o libexslt_la-math.lo `test -f 'math.c' || echo './'`math.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-math.lo -MD -MP -MF .deps/libexslt_la-math.Tpo -c math.c  -fPIC -DPIC -o .libs/libexslt_la-math.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-math.lo -MD -MP -MF .deps/libexslt_la-math.Tpo -c math.c -o libexslt_la-math.o >/dev/null 2>&1

mv -f .deps/libexslt_la-math.Tpo .deps/libexslt_la-math.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libexslt_la-saxon.lo -MD -MP -MF .deps/libexslt_la-saxon.Tpo -c -o libexslt_la-saxon.lo `test -f 'saxon.c' || echo './'`saxon.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-saxon.lo -MD -MP -MF .deps/libexslt_la-saxon.Tpo -c saxon.c  -fPIC -DPIC -o .libs/libexslt_la-saxon.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-saxon.lo -MD -MP -MF .deps/libexslt_la-saxon.Tpo -c saxon.c -o libexslt_la-saxon.o >/dev/null 2>&1

mv -f .deps/libexslt_la-saxon.Tpo .deps/libexslt_la-saxon.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libexslt_la-sets.lo -MD -MP -MF .deps/libexslt_la-sets.Tpo -c -o libexslt_la-sets.lo `test -f 'sets.c' || echo './'`sets.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-sets.lo -MD -MP -MF .deps/libexslt_la-sets.Tpo -c sets.c  -fPIC -DPIC -o .libs/libexslt_la-sets.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-sets.lo -MD -MP -MF .deps/libexslt_la-sets.Tpo -c sets.c -o libexslt_la-sets.o >/dev/null 2>&1

mv -f .deps/libexslt_la-sets.Tpo .deps/libexslt_la-sets.Plo

/bin/sh ../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..     -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libexslt_la-strings.lo -MD -MP -MF .deps/libexslt_la-strings.Tpo -c -o libexslt_la-strings.lo `test -f 'strings.c' || echo './'`strings.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-strings.lo -MD -MP -MF .deps/libexslt_la-strings.Tpo -c strings.c  -fPIC -DPIC -o .libs/libexslt_la-strings.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libexslt_la-strings.lo -MD -MP -MF .deps/libexslt_la-strings.Tpo -c strings.c -o libexslt_la-strings.o >/dev/null 2>&1

mv -f .deps/libexslt_la-strings.Tpo .deps/libexslt_la-strings.Plo

/bin/sh ../../libtool  --tag=CC   --mode=link gcc  -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3   -o libexslt.la  libexslt_la-common.lo libexslt_la-date.lo libexslt_la-dynamic.lo libexslt_la-exslt.lo libexslt_la-functions.lo libexslt_la-math.lo libexslt_la-saxon.lo libexslt_la-sets.lo libexslt_la-strings.lo ../../src/libxml2/libxml2.la ../../src/libxslt/libxslt.la -lz -lm 

libtool: link: (cd .libs/libexslt.lax/libxml2.a && ar x "/home/mcorces/tools/meme_4.11.1/src/libexslt/../../src/libxml2/.libs/libxml2.a")

libtool: link: (cd .libs/libexslt.lax/libxslt.a && ar x "/home/mcorces/tools/meme_4.11.1/src/libexslt/../../src/libxslt/.libs/libxslt.a")

copying selected object files to avoid basename conflicts...

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-HTMLparser.o .libs/libexslt.lax/lt1-libxml2_la-HTMLparser.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-HTMLparser.o .libs/libexslt.lax/lt1-libxml2_la-HTMLparser.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-HTMLtree.o .libs/libexslt.lax/lt2-libxml2_la-HTMLtree.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-HTMLtree.o .libs/libexslt.lax/lt2-libxml2_la-HTMLtree.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-SAX2.o .libs/libexslt.lax/lt3-libxml2_la-SAX2.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-SAX2.o .libs/libexslt.lax/lt3-libxml2_la-SAX2.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-chvalid.o .libs/libexslt.lax/lt4-libxml2_la-chvalid.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-chvalid.o .libs/libexslt.lax/lt4-libxml2_la-chvalid.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-debugXML.o .libs/libexslt.lax/lt5-libxml2_la-debugXML.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-debugXML.o .libs/libexslt.lax/lt5-libxml2_la-debugXML.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-dict.o .libs/libexslt.lax/lt6-libxml2_la-dict.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-dict.o .libs/libexslt.lax/lt6-libxml2_la-dict.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-encoding.o .libs/libexslt.lax/lt7-libxml2_la-encoding.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-encoding.o .libs/libexslt.lax/lt7-libxml2_la-encoding.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-entities.o .libs/libexslt.lax/lt8-libxml2_la-entities.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-entities.o .libs/libexslt.lax/lt8-libxml2_la-entities.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-error.o .libs/libexslt.lax/lt9-libxml2_la-error.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-error.o .libs/libexslt.lax/lt9-libxml2_la-error.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-globals.o .libs/libexslt.lax/lt10-libxml2_la-globals.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-globals.o .libs/libexslt.lax/lt10-libxml2_la-globals.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-hash.o .libs/libexslt.lax/lt11-libxml2_la-hash.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-hash.o .libs/libexslt.lax/lt11-libxml2_la-hash.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-list.o .libs/libexslt.lax/lt12-libxml2_la-list.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-list.o .libs/libexslt.lax/lt12-libxml2_la-list.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-parser.o .libs/libexslt.lax/lt13-libxml2_la-parser.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-parser.o .libs/libexslt.lax/lt13-libxml2_la-parser.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-parserInternals.o .libs/libexslt.lax/lt14-libxml2_la-parserInternals.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-parserInternals.o .libs/libexslt.lax/lt14-libxml2_la-parserInternals.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-pattern.o .libs/libexslt.lax/lt15-libxml2_la-pattern.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-pattern.o .libs/libexslt.lax/lt15-libxml2_la-pattern.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-relaxng.o .libs/libexslt.lax/lt16-libxml2_la-relaxng.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-relaxng.o .libs/libexslt.lax/lt16-libxml2_la-relaxng.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-threads.o .libs/libexslt.lax/lt17-libxml2_la-threads.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-threads.o .libs/libexslt.lax/lt17-libxml2_la-threads.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-tree.o .libs/libexslt.lax/lt18-libxml2_la-tree.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-tree.o .libs/libexslt.lax/lt18-libxml2_la-tree.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-uri.o .libs/libexslt.lax/lt19-libxml2_la-uri.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-uri.o .libs/libexslt.lax/lt19-libxml2_la-uri.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-valid.o .libs/libexslt.lax/lt20-libxml2_la-valid.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-valid.o .libs/libexslt.lax/lt20-libxml2_la-valid.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlIO.o .libs/libexslt.lax/lt21-libxml2_la-xmlIO.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlIO.o .libs/libexslt.lax/lt21-libxml2_la-xmlIO.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlmemory.o .libs/libexslt.lax/lt22-libxml2_la-xmlmemory.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlmemory.o .libs/libexslt.lax/lt22-libxml2_la-xmlmemory.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlreader.o .libs/libexslt.lax/lt23-libxml2_la-xmlreader.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlreader.o .libs/libexslt.lax/lt23-libxml2_la-xmlreader.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlregexp.o .libs/libexslt.lax/lt24-libxml2_la-xmlregexp.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlregexp.o .libs/libexslt.lax/lt24-libxml2_la-xmlregexp.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlsave.o .libs/libexslt.lax/lt25-libxml2_la-xmlsave.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlsave.o .libs/libexslt.lax/lt25-libxml2_la-xmlsave.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlschemas.o .libs/libexslt.lax/lt26-libxml2_la-xmlschemas.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlschemas.o .libs/libexslt.lax/lt26-libxml2_la-xmlschemas.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlschemastypes.o .libs/libexslt.lax/lt27-libxml2_la-xmlschemastypes.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlschemastypes.o .libs/libexslt.lax/lt27-libxml2_la-xmlschemastypes.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlstring.o .libs/libexslt.lax/lt28-libxml2_la-xmlstring.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlstring.o .libs/libexslt.lax/lt28-libxml2_la-xmlstring.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlunicode.o .libs/libexslt.lax/lt29-libxml2_la-xmlunicode.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlunicode.o .libs/libexslt.lax/lt29-libxml2_la-xmlunicode.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlwriter.o .libs/libexslt.lax/lt30-libxml2_la-xmlwriter.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlwriter.o .libs/libexslt.lax/lt30-libxml2_la-xmlwriter.o

libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xpath.o .libs/libexslt.lax/lt31-libxml2_la-xpath.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xpath.o .libs/libexslt.lax/lt31-libxml2_la-xpath.o

libtool: link: ar cru .libs/libexslt.a .libs/libexslt_la-common.o .libs/libexslt_la-date.o .libs/libexslt_la-dynamic.o .libs/libexslt_la-exslt.o .libs/libexslt_la-functions.o .libs/libexslt_la-math.o .libs/libexslt_la-saxon.o .libs/libexslt_la-sets.o .libs/libexslt_la-strings.o .libs/libexslt.lax/libxml2.a/libxml2_la-HTMLparser.o .libs/libexslt.lax/libxml2.a/libxml2_la-HTMLtree.o .libs/libexslt.lax/libxml2.a/libxml2_la-SAX2.o .libs/libexslt.lax/libxml2.a/libxml2_la-chvalid.o .libs/libexslt.lax/libxml2.a/libxml2_la-debugXML.o .libs/libexslt.lax/libxml2.a/libxml2_la-dict.o .libs/libexslt.lax/libxml2.a/libxml2_la-encoding.o .libs/libexslt.lax/libxml2.a/libxml2_la-entities.o .libs/libexslt.lax/libxml2.a/libxml2_la-error.o .libs/libexslt.lax/libxml2.a/libxml2_la-globals.o .libs/libexslt.lax/libxml2.a/libxml2_la-hash.o .libs/libexslt.lax/libxml2.a/libxml2_la-list.o .libs/libexslt.lax/libxml2.a/libxml2_la-parser.o .libs/libexslt.lax/libxml2.a/libxml2_la-parserInternals.o .libs/libexslt.lax/libxml2.a/libxml2_la-pattern.o .libs/libexslt.lax/libxml2.a/libxml2_la-relaxng.o .libs/libexslt.lax/libxml2.a/libxml2_la-threads.o .libs/libexslt.lax/libxml2.a/libxml2_la-tree.o .libs/libexslt.lax/libxml2.a/libxml2_la-uri.o .libs/libexslt.lax/libxml2.a/libxml2_la-valid.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlIO.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlmemory.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlreader.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlregexp.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlsave.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlschemas.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlschemastypes.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlstring.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlunicode.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlwriter.o .libs/libexslt.lax/libxml2.a/libxml2_la-xpath.o .libs/libexslt.lax/lt1-libxml2_la-HTMLparser.o .libs/libexslt.lax/lt2-libxml2_la-HTMLtree.o .libs/libexslt.lax/lt3-libxml2_la-SAX2.o .libs/libexslt.lax/lt4-libxml2_la-chvalid.o .libs/libexslt.lax/lt5-libxml2_la-debugXML.o .libs/libexslt.lax/lt6-libxml2_la-dict.o .libs/libexslt.lax/lt7-libxml2_la-encoding.o .libs/libexslt.lax/lt8-libxml2_la-entities.o .libs/libexslt.lax/lt9-libxml2_la-error.o .libs/libexslt.lax/lt10-libxml2_la-globals.o .libs/libexslt.lax/lt11-libxml2_la-hash.o .libs/libexslt.lax/lt12-libxml2_la-list.o .libs/libexslt.lax/lt13-libxml2_la-parser.o .libs/libexslt.lax/lt14-libxml2_la-parserInternals.o .libs/libexslt.lax/lt15-libxml2_la-pattern.o .libs/libexslt.lax/lt16-libxml2_la-relaxng.o .libs/libexslt.lax/lt17-libxml2_la-threads.o .libs/libexslt.lax/lt18-libxml2_la-tree.o .libs/libexslt.lax/lt19-libxml2_la-uri.o .libs/libexslt.lax/lt20-libxml2_la-valid.o .libs/libexslt.lax/lt21-libxml2_la-xmlIO.o .libs/libexslt.lax/lt22-libxml2_la-xmlmemory.o .libs/libexslt.lax/lt23-libxml2_la-xmlreader.o .libs/libexslt.lax/lt24-libxml2_la-xmlregexp.o .libs/libexslt.lax/lt25-libxml2_la-xmlsave.o .libs/libexslt.lax/lt26-libxml2_la-xmlschemas.o .libs/libexslt.lax/lt27-libxml2_la-xmlschemastypes.o .libs/libexslt.lax/lt28-libxml2_la-xmlstring.o .libs/libexslt.lax/lt29-libxml2_la-xmlunicode.o .libs/libexslt.lax/lt30-libxml2_la-xmlwriter.o .libs/libexslt.lax/lt31-libxml2_la-xpath.o .libs/libexslt.lax/libxslt.a/libxslt_la-attributes.o .libs/libexslt.lax/libxslt.a/libxslt_la-attrvt.o .libs/libexslt.lax/libxslt.a/libxslt_la-documents.o .libs/libexslt.lax/libxslt.a/libxslt_la-extensions.o .libs/libexslt.lax/libxslt.a/libxslt_la-extra.o .libs/libexslt.lax/libxslt.a/libxslt_la-functions.o .libs/libexslt.lax/libxslt.a/libxslt_la-imports.o .libs/libexslt.lax/libxslt.a/libxslt_la-keys.o .libs/libexslt.lax/libxslt.a/libxslt_la-namespaces.o .libs/libexslt.lax/libxslt.a/libxslt_la-numbers.o .libs/libexslt.lax/libxslt.a/libxslt_la-pattern.o .libs/libexslt.lax/libxslt.a/libxslt_la-preproc.o .libs/libexslt.lax/libxslt.a/libxslt_la-security.o .libs/libexslt.lax/libxslt.a/libxslt_la-templates.o .libs/libexslt.lax/libxslt.a/libxslt_la-transform.o .libs/libexslt.lax/libxslt.a/libxslt_la-variables.o .libs/libexslt.lax/libxslt.a/libxslt_la-xslt.o .libs/libexslt.lax/libxslt.a/libxslt_la-xsltlocale.o .libs/libexslt.lax/libxslt.a/libxslt_la-xsltutils.o

libtool: link: ranlib .libs/libexslt.a

libtool: link: rm -fr .libs/libexslt.lax .libs/libexslt.lax

libtool: link: ( cd ".libs" && rm -f "libexslt.la" && ln -s "../libexslt.la" "libexslt.la" )

make[4]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src/libexslt'

Making all in .

make[4]: Entering directory `/arrayBp3/mcorces/tools/meme_4.11.1/src'

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-alignment.lo -MD -MP -MF .deps/libcommon_la-alignment.Tpo -c -o libcommon_la-alignment.lo `test -f 'alignment.c' || echo './'`alignment.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alignment.lo -MD -MP -MF .deps/libcommon_la-alignment.Tpo -c alignment.c  -fPIC -DPIC -o .libs/libcommon_la-alignment.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alignment.lo -MD -MP -MF .deps/libcommon_la-alignment.Tpo -c alignment.c -o libcommon_la-alignment.o >/dev/null 2>&1

mv -f .deps/libcommon_la-alignment.Tpo .deps/libcommon_la-alignment.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-alph-in.lo -MD -MP -MF .deps/libcommon_la-alph-in.Tpo -c -o libcommon_la-alph-in.lo `test -f 'alph-in.c' || echo './'`alph-in.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alph-in.lo -MD -MP -MF .deps/libcommon_la-alph-in.Tpo -c alph-in.c  -fPIC -DPIC -o .libs/libcommon_la-alph-in.o

alph-in.c: In function ‘hsv2rgb’:

alph-in.c:153:3: warning: implicit declaration of function ‘round’ [-Wimplicit-function-declaration]

   red = (uint8_t)round(r * 255.0);

   ^

alph-in.c:153:18: warning: incompatible implicit declaration of built-in function ‘round’ [enabled by default]

   red = (uint8_t)round(r * 255.0);

                  ^

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alph-in.lo -MD -MP -MF .deps/libcommon_la-alph-in.Tpo -c alph-in.c -o libcommon_la-alph-in.o >/dev/null 2>&1

mv -f .deps/libcommon_la-alph-in.Tpo .deps/libcommon_la-alph-in.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-alphabet.lo -MD -MP -MF .deps/libcommon_la-alphabet.Tpo -c -o libcommon_la-alphabet.lo `test -f 'alphabet.c' || echo './'`alphabet.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alphabet.lo -MD -MP -MF .deps/libcommon_la-alphabet.Tpo -c alphabet.c  -fPIC -DPIC -o .libs/libcommon_la-alphabet.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alphabet.lo -MD -MP -MF .deps/libcommon_la-alphabet.Tpo -c alphabet.c -o libcommon_la-alphabet.o >/dev/null 2>&1

mv -f .deps/libcommon_la-alphabet.Tpo .deps/libcommon_la-alphabet.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-array.lo -MD -MP -MF .deps/libcommon_la-array.Tpo -c -o libcommon_la-array.lo `test -f 'array.c' || echo './'`array.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-array.lo -MD -MP -MF .deps/libcommon_la-array.Tpo -c array.c  -fPIC -DPIC -o .libs/libcommon_la-array.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-array.lo -MD -MP -MF .deps/libcommon_la-array.Tpo -c array.c -o libcommon_la-array.o >/dev/null 2>&1

mv -f .deps/libcommon_la-array.Tpo .deps/libcommon_la-array.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-array-list.lo -MD -MP -MF .deps/libcommon_la-array-list.Tpo -c -o libcommon_la-array-list.lo `test -f 'array-list.c' || echo './'`array-list.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-array-list.lo -MD -MP -MF .deps/libcommon_la-array-list.Tpo -c array-list.c  -fPIC -DPIC -o .libs/libcommon_la-array-list.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-array-list.lo -MD -MP -MF .deps/libcommon_la-array-list.Tpo -c array-list.c -o libcommon_la-array-list.o >/dev/null 2>&1

mv -f .deps/libcommon_la-array-list.Tpo .deps/libcommon_la-array-list.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-binary-search.lo -MD -MP -MF .deps/libcommon_la-binary-search.Tpo -c -o libcommon_la-binary-search.lo `test -f 'binary-search.c' || echo './'`binary-search.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-binary-search.lo -MD -MP -MF .deps/libcommon_la-binary-search.Tpo -c binary-search.c  -fPIC -DPIC -o .libs/libcommon_la-binary-search.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-binary-search.lo -MD -MP -MF .deps/libcommon_la-binary-search.Tpo -c binary-search.c -o libcommon_la-binary-search.o >/dev/null 2>&1

mv -f .deps/libcommon_la-binary-search.Tpo .deps/libcommon_la-binary-search.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-binomial.lo -MD -MP -MF .deps/libcommon_la-binomial.Tpo -c -o libcommon_la-binomial.lo `test -f 'binomial.c' || echo './'`binomial.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-binomial.lo -MD -MP -MF .deps/libcommon_la-binomial.Tpo -c binomial.c  -fPIC -DPIC -o .libs/libcommon_la-binomial.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-binomial.lo -MD -MP -MF .deps/libcommon_la-binomial.Tpo -c binomial.c -o libcommon_la-binomial.o >/dev/null 2>&1

mv -f .deps/libcommon_la-binomial.Tpo .deps/libcommon_la-binomial.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-build-hmm.lo -MD -MP -MF .deps/libcommon_la-build-hmm.Tpo -c -o libcommon_la-build-hmm.lo `test -f 'build-hmm.c' || echo './'`build-hmm.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-build-hmm.lo -MD -MP -MF .deps/libcommon_la-build-hmm.Tpo -c build-hmm.c  -fPIC -DPIC -o .libs/libcommon_la-build-hmm.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-build-hmm.lo -MD -MP -MF .deps/libcommon_la-build-hmm.Tpo -c build-hmm.c -o libcommon_la-build-hmm.o >/dev/null 2>&1

mv -f .deps/libcommon_la-build-hmm.Tpo .deps/libcommon_la-build-hmm.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-buffer.lo -MD -MP -MF .deps/libcommon_la-buffer.Tpo -c -o libcommon_la-buffer.lo `test -f 'buffer.c' || echo './'`buffer.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-buffer.lo -MD -MP -MF .deps/libcommon_la-buffer.Tpo -c buffer.c  -fPIC -DPIC -o .libs/libcommon_la-buffer.o

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-buffer.lo -MD -MP -MF .deps/libcommon_la-buffer.Tpo -c buffer.c -o libcommon_la-buffer.o >/dev/null 2>&1

mv -f .deps/libcommon_la-buffer.Tpo .deps/libcommon_la-buffer.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-ceqlogo.lo -MD -MP -MF .deps/libcommon_la-ceqlogo.Tpo -c -o libcommon_la-ceqlogo.lo `test -f 'ceqlogo.c' || echo './'`ceqlogo.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-ceqlogo.lo -MD -MP -MF .deps/libcommon_la-ceqlogo.Tpo -c ceqlogo.c  -fPIC -DPIC -o .libs/libcommon_la-ceqlogo.o

ceqlogo.c: In function ‘EPS_tokens’:

ceqlogo.c:1042:3: warning: implicit declaration of function ‘log2’ [-Wimplicit-function-declaration]

   rbtree_put(tokens, "$BARBITS", STR_dbl(log2(alph_size_core(params->alphabet))));

   ^

ceqlogo.c:1042:42: warning: incompatible implicit declaration of built-in function ‘log2’ [enabled by default]

   rbtree_put(tokens, "$BARBITS", STR_dbl(log2(alph_size_core(params->alphabet))));

                                          ^

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-ceqlogo.lo -MD -MP -MF .deps/libcommon_la-ceqlogo.Tpo -c ceqlogo.c -o libcommon_la-ceqlogo.o >/dev/null 2>&1

mv -f .deps/libcommon_la-ceqlogo.Tpo .deps/libcommon_la-ceqlogo.Plo

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -fno-strict-aliasing  -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-cisml.lo -MD -MP -MF .deps/libcommon_la-cisml.Tpo -c -o libcommon_la-cisml.lo `test -f 'cisml.c' || echo './'`cisml.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-cisml.lo -MD -MP -MF .deps/libcommon_la-cisml.Tpo -c cisml.c  -fPIC -DPIC -o .libs/libcommon_la-cisml.o

cisml.c: In function ‘allocate_multi_pattern_match’:

cisml.c:964:19: error: ‘NAN’ undeclared (first use in this function)

   match->qvalue = NAN;

                   ^

cisml.c:964:19: note: each undeclared identifier is reported only once for each function it appears in

make[4]: *** [libcommon_la-cisml.lo] Error 1

make[4]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src'

make[3]: *** [all-recursive] Error 1

make[3]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src'

make[2]: *** [all] Error 2

make[2]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1/src'

make[1]: *** [all-recursive] Error 1

make[1]: Leaving directory `/arrayBp3/mcorces/tools/meme_4.11.1'

[CharlesEGrant]

It looks like both of you are working with an older release of Linux. I was able to duplicate your problem on a version of Fedora from about 10 years ago. It seems that some of the system header files have changed over the years. The immediate problem both of you have run into is that older versions of <math.h> don't define NAN. You can work around this by defining it on the 'make' command line:

make cleanmake AM_CFLAGS='-DNAN="(0.0/0.0)"'

Once you fix that, you may run into further errors telling you that WEXITSTATUS and WFEXITED

are not defined for the module mast.c. To fix that you'll need to edit the file src/mast.h

and add the line:

#include <sys/wait.h>

after the line <sys/types.h> on line 22.

[Ryan Corces-Zimmerman]

Hi Charles,

This is exactly what the problem was. Your solution worked perfectly.

Thanks so much!

-ryan

[Arun Prasanna]

Hi,

In my case, all the tests passed. but, I am not able to locate where meme is !!. In the src folder every executables are there except meme. For instance, i can find meme2alph, meme2meme....etc. Can you let me know, if there is any mistake in installation ?

Thanks,

Arun

[CharlesEGrant]

Hi Arun,

Look in the src/parallel directory for the MEME binary. In order to install it you will need to run 'make install'.

Charels