MEME suite install error

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Hiko Wong

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May 16, 2017, 2:47:17 AM5/16/17
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cd tests/scripts; make check
make[1]: Entering directory '/home/kaho/Downloads/meme_4.11.3/tests/scripts'
make  test_driver
make[2]: Entering directory '/home/kaho/Downloads/meme_4.11.3/tests/scripts'
make[2]: 'test_driver' is up to date.
make[2]: Leaving directory '/home/kaho/Downloads/meme_4.11.3/tests/scripts'
make  check-TESTS
make[2]: Entering directory '/home/kaho/Downloads/meme_4.11.3/tests/scripts'
make[3]: Entering directory '/home/kaho/Downloads/meme_4.11.3/tests/scripts'
PASS: ama1
PASS: ama2
PASS: ame1
PASS: centrimo1
PASS: create-priors1
PASS: create-priors2
ERROR: /home/kaho/Downloads/meme_4.11.3/tests/scripts/dreme.test (FAULT IN TEST!)
PASS: fasta-center1
PASS: fasta-dinucleotide-shuffle1
PASS: fimo1
PASS: fimo2
PASS: fimo3
PASS: fimo4
PASS: glam2_1
PASS: glam2scan1
PASS: gomo1
PASS: gomo2
PASS: mast1
PASS: mast2
PASS: mast3
PASS: mast4
PASS: mast5
PASS: mast6
PASS: mast7
PASS: mast8
PASS: mast9
PASS: mast10
PASS: mast11
PASS: mast12
PASS: mast13
PASS: mast14
PASS: mast15
PASS: mast16
PASS: mast17
PASS: mast18
PASS: mcast1
PASS: meme1
PASS: meme2
PASS: meme3
PASS: meme4
PASS: meme5
PASS: meme6
PASS: meme_psp
PASS: motif-in.meme.crp0.text
PASS: motif-in.meme.crp0.xml
PASS: motif-in.meme.crp0.html
PASS: motif-in.meme.lipocalin.text
PASS: motif-in.meme.lipocalin.xml
PASS: motif-in.meme.lipocalin.html
PASS: motif-in.meme.puf3p.text
PASS: motif-in.meme.puf3p.xml
PASS: motif-in.meme.puf3p.html
PASS: motif-in.meme.crp0.extdna.text
PASS: motif-in.meme.crp0.extdna.xml
PASS: motif-in.meme.crp0.extdna.html
PASS: motif-in.dreme.klf1.text
PASS: motif-in.dreme.klf1.xml
PASS: motif-in.dreme.klf1.html
PASS: motif-in.dreme.klf1.extdna.text
PASS: motif-in.dreme.klf1.extdna.xml
PASS: motif-in.dreme.klf1.extdna.html
PASS: motif-in.dreme.puf3p.text
PASS: motif-in.dreme.puf3p.xml
PASS: motif-in.dreme.puf3p.html
PASS: motiph1
PASS: motiph2
PASS: psp-gen1
PASS: psp-gen2
PASS: psp-gen3
PASS: qvalue1
PASS: spamo1
PASS: spamo2
PASS: tomtom_allr
PASS: tomtom_ed
PASS: tomtom_kullback
PASS: tomtom_pearson
PASS: tomtom_sandelin
PASS: tomtom_blic1
PASS: tomtom_blic5
PASS: tomtom_allr_cs
PASS: tomtom_ed_cs
PASS: tomtom_kullback_cs
PASS: tomtom_pearson_cs
PASS: tomtom_sandelin_cs
PASS: tomtom_blic1_cs
PASS: tomtom_blic5_cs
============================================================================
Testsuite summary for meme 4.11.3
============================================================================
# TOTAL: 86
# PASS:  85
# SKIP:  0
# XFAIL: 0
# FAIL:  0
# XPASS: 0
# ERROR: 1
============================================================================
See tests/scripts/test-suite.log
============================================================================
Makefile:572: recipe for target 'test-suite.log' failed
make[3]: *** [test-suite.log] Error 1
make[3]: Leaving directory '/home/kaho/Downloads/meme_4.11.3/tests/scripts'
Makefile:678: recipe for target 'check-TESTS' failed
make[2]: *** [check-TESTS] Error 2
make[2]: Leaving directory '/home/kaho/Downloads/meme_4.11.3/tests/scripts'
Makefile:744: recipe for target 'check-am' failed
make[1]: *** [check-am] Error 2
make[1]: Leaving directory '/home/kaho/Downloads/meme_4.11.3/tests/scripts'
Makefile:1185: recipe for target 'test' failed
make: *** [test] Error 2


Could anyone help me to fix this problem?

CharlesEGrant

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May 16, 2017, 4:55:55 PM5/16/17
to MEME Suite Q&A
If you look in the file tests/scripts/dreme.log you should find detailed information about why the test failed. The most common cause of the DREME test failing is having an older version of Python. DREME requires Python 2.7. If you have multiple versions of Python installed on your system it may be that the MEME Suite configuration is finding the wrong one. You can specify which copy of Python that the MEME Suite should use by specifying the '--with-python' option to configure.
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