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Nick,
There is a broad ranging discussion of math tools, including MathJax,
on the Moodle.org forums, including discussion of using Internet
Explorer. There is also some discussion of using open tools for
playback of mathml ( for example,
http://speechus.texthelp.com/demopages/MathML/MathML.xhtml or
http://www.firevox.clcworld.net/), which allow you then to abandon
attempting to support IE. I know Mauno has been fiddling with IE for
some time and Jonathan Fine had posted about IE issues as well.
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