Problems of Jetty http 503 SearchPhaseExecutionException: Failed to execute phase [query], all shards failed; shardFailures

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ychen...@gmail.com

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Oct 20, 2015, 8:05:14 AM10/20/15

to Lumify

Hi,All

when I run vagrant provision demo ,downloaded all the dependencies and mvn complied.In firefox ,http://lumify-demo:8080/，returns

"HTTP ERROR: 503

Problem accessing /. Reason:

Service Unavailable

The log is

==> demo: Install Lumify Web App

==> demo: Running provisioner: shell...

demo: Running: inline script

==> demo: Starting Jetty...

==> demo: Starting Jetty:

==> demo: Picked up JAVA_TOOL_OPTIONS: -Dfile.encoding=UTF-8

==> demo: 2015-10-20 10:30:18.686:INFO::main: Logging initialized @700ms

==> demo: 2015-10-20 10:30:18.799:WARN:oejs.HomeBaseWarning:main: This instance of Jetty is not running from a separate {jetty.base} directory, this is not recommended. See documentation at http://www.eclipse.org/jetty/documentation/current/startup.html

==> demo: 2015-10-20 10:30:18.828:INFO::main: Redirecting stderr/stdout to /opt/jetty-distribution-9.2.7.v20150116/logs/2015_10_20.stderrout.log

==> demo: .

==> demo: OK Tue Oct 20 10:31:06 UTC 2015

The /opt/jetty-distribution-9.2.7.v20150116/logs/2015_10_20.stderrout.log is

Caused by:

org.elasticsearch.action.search.SearchPhaseExecutionException: Failed to execute phase [query], all shards failed; shardFailures {[tc4OUa90Qci1HivRYplwZA][securegraph][0]: RemoteTransportException[[Captain Savage][inet[/10.0.2.15:9301]][indices:data/read/search[phase/query]]]; nested: SearchParseException[[securegraph][0]: from[0],size[10000]: Parse Failure [Failed to parse source [{"from":0,"size":10000,"query":{"function_score":{"query":{"filtered":{"query":{"bool":{"must":{"has_child":{"query":{"filtered":{"query":{"match_all":{}},"filter":{"and":{"filters":[{"authorizations":["ontology"]},{"term":{"http://lumify.io#conceptType_exactMatch":"concept"}}]}}}},"child_type":"property","score_type":"avg"}}}},"filter":{"and":{"filters":[{"terms":{"__elementType":["vertex"]}},{"authorizations":["ontology"]}]}}}},"functions":[{"script_score":{"script":"_score * sqrt( 1 + (inEdgeMultiplier * doc['__inEdgeCount'].value) + (outEdgeMultiplier * doc['__outEdgeCount'].value) )","lang":"groovy","params":{"outEdgeMultiplier":1.1,"inEdgeMultiplier":1.2}}}]}}}]]]; nested: QueryParsingException[[securegraph] No filter registered for [authorizations]]; }{[zebKAWSrQvmOMqceTrKhxA][securegraph][1]: RemoteTransportException[[Fer-de-Lance][inet[/10.0.2.15:9302]][indices:data/read/search[phase/query]]]; nested: SearchParseException[[securegraph][1]: from[0],size[10000]: Parse Failure [Failed to parse source [{"from":0,"size":10000,"query":{"function_score":{"query":{"filtered":{"query":{"bool":{"must":{"has_child":{"query":{"filtered":{"query":{"match_all":{}},"filter":{"and":{"filters":[{"authorizations":["ontology"]},{"term":{"http://lumify.io#conceptType_exactMatch":"concept"}}]}}}},"child_type":"property","score_type":"avg"}}}},"filter":{"and":{"filters":[{"terms":{"__elementType":["vertex"]}},{"authorizations":["ontology"]}]}}}},"functions":[{"script_score":{"script":"_score * sqrt( 1 + (inEdgeMultiplier * doc['__inEdgeCount'].value) + (outEdgeMultiplier * doc['__outEdgeCount'].value) )","lang":"groovy","params":{"outEdgeMultiplier":1.1,"inEdgeMultiplier":1.2}}}]}}}]]]; nested: QueryParsingException[[securegraph] No filter registered for [authorizations]]; }{[-VoqtZigQQ6273mV2-C9vA][securegraph][2]: SearchParseException[[securegraph][2]: from[0],size[10000]: Parse Failure [Failed to parse source [{"from":0,"size":10000,"query":{"function_score":{"query":{"filtered":{"query":{"bool":{"must":{"has_child":{"query":{"filtered":{"query":{"match_all":{}},"filter":{"and":{"filters":[{"authorizations":["ontology"]},{"term":{"http://lumify.io#conceptType_exactMatch":"concept"}}]}}}},"child_type":"property","score_type":"avg"}}}},"filter":{"and":{"filters":[{"terms":{"__elementType":["vertex"]}},{"authorizations":["ontology"]}]}}}},"functions":[{"script_score":{"script":"_score * sqrt( 1 + (inEdgeMultiplier * doc['__inEdgeCount'].value) + (outEdgeMultiplier * doc['__outEdgeCount'].value) )","lang":"groovy","params":{"outEdgeMultiplier":1.1,"inEdgeMultiplier":1.2}}}]}}}]]]; nested: QueryParsingException[[securegraph] script_score the script could not be loaded]; nested: ScriptException[dynamic scripting for [groovy] disabled]; }{[-VoqtZigQQ6273mV2-C9vA][securegraph][3]: SearchParseException[[securegraph][3]: from[0],size[10000]: Parse Failure [Failed to parse source [{"from":0,"size":10000,"query":{"function_score":{"query":{"filtered":{"query":{"bool":{"must":{"has_child":{"query":{"filtered":{"query":{"match_all":{}},"filter":{"and":{"filters":[{"authorizations":["ontology"]},{"term":{"http://lumify.io#conceptType_exactMatch":"concept"}}]}}}},"child_type":"property","score_type":"avg"}}}},"filter":{"and":{"filters":[{"terms":{"__elementType":["vertex"]}},{"authorizations":["ontology"]}]}}}},"functions":[{"script_score":{"script":"_score * sqrt( 1 + (inEdgeMultiplier * doc['__inEdgeCount'].value) + (outEdgeMultiplier * doc['__outEdgeCount'].value) )","lang":"groovy","params":{"outEdgeMultiplier":1.1,"inEdgeMultiplier":1.2}}}]}}}]]]; nested: QueryParsingException[[securegraph] script_score the script could not be loaded]; nested: ScriptException[dynamic scripting for [groovy] disabled]; }{[zebKAWSrQvmOMqceTrKhxA][securegraph][4]: RemoteTransportException[[Fer-de-Lance][inet[/10.0.2.15:9302]][indices:data/read/search[phase/query]]]; nested: SearchParseException[[securegraph][4]: from[0],size[10000]: Parse Failure [Failed to parse source [{"from":0,"size":10000,"query":{"function_score":{"query":{"filtered":{"query":{"bool":{"must":{"has_child":{"query":{"filtered":{"query":{"match_all":{}},"filter":{"and":{"filters":[{"authorizations":["ontology"]},{"term":{"http://lumify.io#conceptType_exactMatch":"concept"}}]}}}},"child_type":"property","score_type":"avg"}}}},"filter":{"and":{"filters":[{"terms":{"__elementType":["vertex"]}},{"authorizations":["ontology"]}]}}}},"functions":[{"script_score":{"script":"_score * sqrt( 1 + (inEdgeMultiplier * doc['__inEdgeCount'].value) + (outEdgeMultiplier * doc['__outEdgeCount'].value) )","lang":"groovy","params":{"outEdgeMultiplier":1.1,"inEdgeMultiplier":1.2}}}]}}}]]]; nested: QueryParsingException[[securegraph] No filter registered for [authorizations]]; }

at org.elasticsearch.action.search.type.TransportSearchTypeAction$BaseAsyncAction.onFirstPhaseResult(TransportSearchTypeAction.java:233)

at org.elasticsearch.action.search.type.TransportSearchTypeAction$BaseAsyncAction$1.onFailure(TransportSearchTypeAction.java:179)

at org.elasticsearch.search.action.SearchServiceTransportAction$6.handleException(SearchServiceTransportAction.java:249)

at org.elasticsearch.transport.netty.MessageChannelHandler.handleException(MessageChannelHandler.java:185)

at org.elasticsearch.transport.netty.MessageChannelHandler.handlerResponseError(MessageChannelHandler.java:175)

at org.elasticsearch.transport.netty.MessageChannelHandler.messageReceived(MessageChannelHandler.java:125)

at org.elasticsearch.common.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)

at org.elasticsearch.common.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:564)

at org.elasticsearch.common.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:791)

at org.elasticsearch.common.netty.channel.Channels.fireMessageReceived(Channels.java:296)

at org.elasticsearch.common.netty.handler.codec.frame.FrameDecoder.unfoldAndFireMessageReceived(FrameDecoder.java:462)

at org.elasticsearch.common.netty.handler.codec.frame.FrameDecoder.callDecode(FrameDecoder.java:443)

at org.elasticsearch.common.netty.handler.codec.frame.FrameDecoder.messageReceived(FrameDecoder.java:303)

at org.elasticsearch.common.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)

at org.elasticsearch.common.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:564)

at org.elasticsearch.common.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:559)

at org.elasticsearch.common.netty.channel.Channels.fireMessageReceived(Channels.java:268)

at org.elasticsearch.common.netty.channel.Channels.fireMessageReceived(Channels.java:255)

at org.elasticsearch.common.netty.channel.socket.nio.NioWorker.read(NioWorker.java:88)

at org.elasticsearch.common.netty.channel.socket.nio.AbstractNioWorker.process(AbstractNioWorker.java:108)

at org.elasticsearch.common.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:318)

at org.elasticsearch.common.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)

at org.elasticsearch.common.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)

at org.elasticsearch.common.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)

at org.elasticsearch.common.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)

at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)

at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)

at java.lang.Thread.run(Thread.java:745)

2015-10-20 11:28:30.085:INFO:oejs.ServerConnector:main: Started ServerConnector@3fbee0c1{HTTP/1.1}{0.0.0.0:8080}

2015-10-20 11:28:30.098:INFO:oejs.ServerConnector:main: Started ServerConnector@4e88b44d{SSL-http/1.1}{0.0.0.0:8443}

2015-10-20 11:28:30.098:INFO:oejs.Server:main: Started @47597ms

cheng

ychen...@gmail.com

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Oct 20, 2015, 11:15:56 PM10/20/15

to Lumify

I sovled it by install elasticsearch plugins.But there are other problems.How can i fix it?

Any one can help me ?

Thanks very much.

cheng

The error log :

2015-10-21 02:17:41.000/UTC WARN [hadoop.util.NativeCodeLoader] Unable to load native-hadoop library for your platform... using builtin-java classes where applicable

2015-10-21 02:17:47.019:WARN:oejw.WebAppContext:main: Failed startup of context o.e.j.w.WebAppContext@498fb7b1{/lumify,file:/tmp/jetty-0.0.0.0-8080-lumify.war-_lumify-any-2153728562654795700.dir/webapp/,STARTING}{/lumify.war}

com.google.inject.ProvisionException: Guice provision errors:||1) Error injecting constructor, io.lumify.core.exception.LumifyException: Could not import ontology file: base.owl (iri: http://lumify.io)| at io.lumify.securegraph.model.ontology.SecureGraphOntologyRepository.<init>(SecureGraphOntologyRepository.java:68)| at io.lumify.securegraph.model.ontology.SecureGraphOntologyRepository.class(SecureGraphOntologyRepository.java:40)| while locating io.lumify.securegraph.model.ontology.SecureGraphOntologyRepository| at io.lumify.core.bootstrap.LumifyBootstrap.configure(LumifyBootstrap.java:140)| at io.lumify.core.bootstrap.LumifyBootstrap.configure(LumifyBootstrap.java:140)| while locating io.lumify.core.model.ontology.OntologyRepository| for parameter 3 at io.lumify.securegraph.model.user.SecureGraphUserRepository.<init>(SecureGraphUserRepository.java:60)| at io.lumify.securegraph.model.user.SecureGraphUserRepository.class(SecureGraphUserRepository.java:39)| while locating io.lumify.securegraph.model.user.SecureGraphUserRepository| at io.lumify.core.bootstrap.LumifyBootstrap.configure(LumifyBootstrap.java:131)| at io.lumify.core.bootstrap.LumifyBootstrap.configure(LumifyBootstrap.java:131)| while locating io.lumify.core.model.user.UserRepository| for parameter 0 at io.lumify.web.ApplicationBootstrap.setUserRepository(ApplicationBootstrap.java:107)| while locating io.lumify.web.ApplicationBootstrap||1 error

at com.google.inject.internal.Errors.throwProvisionExceptionIfErrorsExist(Errors.java:451)

at com.google.inject.internal.MembersInjectorImpl.injectMembers(MembersInjectorImpl.java:65)

at com.google.inject.internal.InjectorImpl.injectMembers(InjectorImpl.java:944)

at io.lumify.core.bootstrap.InjectHelper.inject(InjectHelper.java:33)

at io.lumify.core.bootstrap.InjectHelper.inject(InjectHelper.java:25)

at io.lumify.web.ApplicationBootstrap.setupInjector(ApplicationBootstrap.java:112)

at io.lumify.web.ApplicationBootstrap.contextInitialized(ApplicationBootstrap.java:62)

at org.eclipse.jetty.server.handler.ContextHandler.callContextInitialized(ContextHandler.java:800)

at org.eclipse.jetty.servlet.ServletContextHandler.callContextInitialized(ServletContextHandler.java:444)

at org.eclipse.jetty.server.handler.ContextHandler.startContext(ContextHandler.java:791)

at org.eclipse.jetty.servlet.ServletContextHandler.startContext(ServletContextHandler.java:294)

at org.eclipse.jetty.webapp.WebAppContext.startWebapp(WebAppContext.java:1349)

at org.eclipse.jetty.webapp.WebAppContext.startContext(WebAppContext.java:1342)

at org.eclipse.jetty.server.handler.ContextHandler.doStart(ContextHandler.java:741)

at org.eclipse.jetty.webapp.WebAppContext.doStart(WebAppContext.java:505)

at org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)

at org.eclipse.jetty.deploy.bindings.StandardStarter.processBinding(StandardStarter.java:41)

at org.eclipse.jetty.deploy.AppLifeCycle.runBindings(AppLifeCycle.java:186)

at org.eclipse.jetty.deploy.DeploymentManager.requestAppGoal(DeploymentManager.java:498)

at org.eclipse.jetty.deploy.DeploymentManager.addApp(DeploymentManager.java:146)

at org.eclipse.jetty.deploy.providers.ScanningAppProvider.fileAdded(ScanningAppProvider.java:180)

at org.eclipse.jetty.deploy.providers.WebAppProvider.fileAdded(WebAppProvider.java:455)

at org.eclipse.jetty.deploy.providers.ScanningAppProvider$1.fileAdded(ScanningAppProvider.java:64)

at org.eclipse.jetty.util.Scanner.reportAddition(Scanner.java:609)

at org.eclipse.jetty.util.Scanner.reportDifferences(Scanner.java:528)

at org.eclipse.jetty.util.Scanner.scan(Scanner.java:391)

at org.eclipse.jetty.util.Scanner.doStart(Scanner.java:313)

at org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)

at org.eclipse.jetty.deploy.providers.ScanningAppProvider.doStart(ScanningAppProvider.java:150)

at org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)

at org.eclipse.jetty.deploy.DeploymentManager.startAppProvider(DeploymentManager.java:560)

at org.eclipse.jetty.deploy.DeploymentManager.doStart(DeploymentManager.java:235)

at org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)

at org.eclipse.jetty.util.component.ContainerLifeCycle.start(ContainerLifeCycle.java:132)

at org.eclipse.jetty.server.Server.start(Server.java:387)

at org.eclipse.jetty.util.component.ContainerLifeCycle.doStart(ContainerLifeCycle.java:114)

at org.eclipse.jetty.server.handler.AbstractHandler.doStart(AbstractHandler.java:61)

at org.eclipse.jetty.server.Server.doStart(Server.java:354)

at org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)

at org.eclipse.jetty.xml.XmlConfiguration$1.run(XmlConfiguration.java:1255)

at java.security.AccessController.doPrivileged(Native Method)

at org.eclipse.jetty.xml.XmlConfiguration.main(XmlConfiguration.java:1174)

at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)

at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)

at java.lang.reflect.Method.invoke(Method.java:606)

at org.eclipse.jetty.start.Main.invokeMain(Main.java:321)

at org.eclipse.jetty.start.Main.start(Main.java:817)

at org.eclipse.jetty.start.Main.main(Main.java:112)

Caused by:

io.lumify.core.exception.LumifyException: Could not import ontology file: base.owl (iri: http://lumify.io)

at io.lumify.core.model.ontology.OntologyRepositoryBase.importResourceOwl(OntologyRepositoryBase.java:123)

at io.lumify.core.model.ontology.OntologyRepositoryBase.loadOntologies(OntologyRepositoryBase.java:64)

at io.lumify.securegraph.model.ontology.SecureGraphOntologyRepository.<init>(SecureGraphOntologyRepository.java:77)

at io.lumify.securegraph.model.ontology.SecureGraphOntologyRepository$$FastClassByGuice$$7fb7e09b.newInstance(<generated>)

at com.google.inject.internal.cglib.reflect.$FastConstructor.newInstance(FastConstructor.java:40)

at com.google.inject.internal.DefaultConstructionProxyFactory$1.newInstance(DefaultConstructionProxyFactory.java:60)

at com.google.inject.internal.ConstructorInjector.construct(ConstructorInjector.java:85)

at com.google.inject.internal.ConstructorBindingImpl$Factory.get(ConstructorBindingImpl.java:254)

at com.google.inject.internal.ProviderToInternalFactoryAdapter$1.call(ProviderToInternalFactoryAdapter.java:46)

at com.google.inject.internal.InjectorImpl.callInContext(InjectorImpl.java:1031)

at com.google.inject.internal.ProviderToInternalFactoryAdapter.get(ProviderToInternalFactoryAdapter.java:40)

at com.google.inject.Scopes$1$1.get(Scopes.java:65)

at com.google.inject.internal.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:40)

at com.google.inject.internal.InjectorImpl$4$1.call(InjectorImpl.java:978)

at com.google.inject.internal.InjectorImpl.callInContext(InjectorImpl.java:1031)

at com.google.inject.internal.InjectorImpl$4.get(InjectorImpl.java:974)

at com.google.inject.internal.InjectorImpl.getInstance(InjectorImpl.java:1013)

at io.lumify.core.bootstrap.InjectHelper.getInstance(InjectHelper.java:50)

at io.lumify.core.bootstrap.LumifyBootstrap$ConfigurableProvider.get(LumifyBootstrap.java:315)

at com.google.inject.internal.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:40)

at com.google.inject.internal.ProviderToInternalFactoryAdapter$1.call(ProviderToInternalFactoryAdapter.java:46)

at com.google.inject.internal.InjectorImpl.callInContext(InjectorImpl.java:1031)

at com.google.inject.internal.ProviderToInternalFactoryAdapter.get(ProviderToInternalFactoryAdapter.java:40)

at com.google.inject.Scopes$1$1.get(Scopes.java:65)

at com.google.inject.internal.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:40)

at com.google.inject.internal.SingleParameterInjector.inject(SingleParameterInjector.java:38)

at com.google.inject.internal.SingleParameterInjector.getAll(SingleParameterInjector.java:62)

at com.google.inject.internal.ConstructorInjector.construct(ConstructorInjector.java:84)