Error with loading Ensemble gene annotations for mm10

[Pabodha Hettige]

Hello,

I am trying to visualize few alignment files using IGV_2.3.94 with reference to some ensembl transcript annotations. I am using Windows 7 (64bit), Java 8. I was able to load Ensemble gene annotations for mm10 previously, though - File > Load from server >Available datasets > Annotations (mm10) > Ensemble genes. Since few days I get this error message "Error loading http://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/ensGenes.txt: File not found: http://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/ensGenes.txt".

I can not see ensGenes.txt file in the given url. I can load "db Snp 1.37" though File > Load from server >Available datasets > Annotations (mm10).

 

Any idea why this happens?

Thank you

Pabodha

[Jim Robinson]

Hi,

Apologies but it looks like that file is no longer available at UCSC.   I will remove the bad link.

Jim