fit data to window when running IGV with a batch file?

[sisterdot]

Dear all...

i am successfully using the batch script screenshot capabilities of
igv as in
http://www.broadinstitute.org/igv/batch
and
http://www.broadinstitute.org/igv/PortCommands

unfortunately i don't see how i can scale my tracks?
a command to "fit data to window" or set a default track height would
be sufficient

is that possible?

thanks for your help
Maria

[Jacob Silterra]

The default track height can be set in View -> Preferences -> Tracks

--
Jacob Silterra
Software Engineer
Broad Institute

[Jim Robinson]

To elaborate a little,  we currently don't have a batch command to do that, we'll put in on our list.  As a workaround you can set the default height through the menu before running the batch script.

Jim

On Wednesday, March 21, 2012 9:23:35 AM UTC-4, Jacob Silterra wrote:

The default track height can be set in View -> Preferences -> Tracks

[Nacho Caballero]

I did Tracks|Set Track height then I chose 20 pixels and ran the batch script, but each track shows a different height

[Salih Tuna]

Has there been an update to this?

[Goutham Radha]

Is there a new command for this?