Then it looks like your model is on the boundary of infeasibility, and small
changes in the model can push it to the other side.
Another test you could try is to take the solution of your formulation and fix
all variables in the new formulation (with indicator constraints) to the values
of the solution to your old model. Then run it (it should be infeasible) and
calculate an IIS to see where the infeasibility is.
Tobias
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