Hi Wayne,
I believe you are seeing those logs in the IndexMerger? If not, can you let me know which file you see the outDir logs?
Also, are you running the HadoopDruidIndexerMain or using the indexing service? The only place that I know of that refers to tmpSegmentDir is in the YeOldePlumberSchool, which is called as part of the index task in druid 0.5.x. If you do have an indexing service running in 0.5.x, you can set the base working directory with "druid.indexer.baseDir". The default value is "tmp".
If you are running the standalone druid hadoop indexer, the outDir is the default temporary-file directory.
Let me know if this helps.
-- FJ