Hello, I'm a new Cytoscape user and I'm having trouble creating standardized images from the networks in Cytoscape. I have a series of neworks that have identical nodes, but different edges. I need to export images of these networks that have the locations of the nodes in locations that are identical down to the pixel. I am using the LayoutSaver/LayoutMapper addon to map the locations of the nods.
What I need is a way to lock or set the exact level of zoom and center location for the window; eyeballing the location and zoom is insufficient for my purposes.
Additionally, the size of the output images should be identical.
Since the images created by Cytoscape seem to be wholly dependent on the image in the window, and not the network, I'm completely stumped at how to achieve the precision I need. If this program is incapable of producing the images I need, that's fine, I just need to know so I can stop wasting time on this pursuit and find another package for visualizing my networks.
Thanks in advance.
-WJL