CytoKEGGParser and KEGGscape
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me.s...@gmail.com
Mar 13, 2018, 9:17:00 AM3/13/18
to cytoscape-helpdesk
Sir,
I have been trying hard to import my KEGG pathways in form of KGML into cytoscape for better analysis.
On using KEGGscape it gives following error -:
"Could Not Unmarshall the file"
Moreover CytoKEGGParser is not getting installed. Even the App link is not working.
Kindly suggest what i can do.
Thanking You
I have been trying hard to import my KEGG pathways in form of KGML into cytoscape for better analysis.
On using KEGGscape it gives following error -:
"Could Not Unmarshall the file"
Moreover CytoKEGGParser is not getting installed. Even the App link is not working.
Kindly suggest what i can do.
Thanking You
Scooter Morris
Mar 15, 2018, 11:07:24 AM3/15/18
to cytoscape-helpdesk
Hi Sonal,
What version of Cytoscape are you using? Can you provide us with the KGML file you are trying to read? That will help us figure out whats going on. Also, there is no "CytoKEGGParser" -- it's "CyKEGGParser".
-- scooter
What version of Cytoscape are you using? Can you provide us with the KGML file you are trying to read? That will help us figure out whats going on. Also, there is no "CytoKEGGParser" -- it's "CyKEGGParser".
-- scooter
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