From GraphQL to Cytoscape data format

[Johann Höchtl]

I really do not want to double-post, but just in case this group is mostly inactive on Stackoverflow ... I have results from a Graph Database, results obtained through GraphQL and would like to visualize it using js.cytoscape.

http://stackoverflow.com/questions/40918996/convert-graphql-to-cytoscape-json

My question now is: How can I effectively convert from my GraphQL retrieved format

    {
       "application" : {
          "has-instance" : [
             {
                "has-table" : [
                   {
                      "has-column" : [
                         {
                            "refers-to-table" : {
                               "label" : "EINGANGHEADER"
                            },
                            "label" : "EINGANG_DAT"
                         },
                         {
                            "label" : "KANAL",
                            "refers-to-table" : {
                               "label" : "EINGANGHEADER"
                            }
                         }
                      ],
                      "label" : "VE_VKE_EINGANGHEADER"
                   },
                   {
                      "has-column" : [
                         {
                            "label" : "PRODUKT",
                            "refers-to-table" : {
                               "label" : "EINGANG"
                            }
                         },
                         {
                            "label" : "ERFASSUNG_TS",
                            "refers-to-table" : {
                               "label" : "EINGANGDATEN"
                            }
                         },
                         {
                            "label" : "ID",
                            "refers-to-table" : {
                               "label" : "EINGANG"
                            }
                         },
                         {
                            "label" : "WEITERLEITUNG_TS",
                            "refers-to-table" : {
                               "label" : "EINGANG"
                            }
                         }
                      ],
                      "label" : "VE_VKE_EINGANG"
                   }
                ],
                "label" : "VE"
             }
          ]
       }
    }


to the Cytoscape data format?

[piet molenaar]

Hi Johann,

It is the other way around, the cytoscape.js community answers questions from stackoverflow. This helpdesk is for the Cytoscape java application.

Cheers,

Piet

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Piet Molenaar
piet...@gmail.com
Department of Oncogenomics, M1-131
Academic Medical Center
University of Amsterdam
Meibergdreef 9
1105 AZ Amsterdam
the Netherlands

tel (+31) 20-5666592
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[Johann Höchtl]

Am Freitag, 2. Dezember 2016 10:15:50 UTC+1 schrieb Piet:

Hi Johann,

It is the other way around, the cytoscape.js community answers questions from stackoverflow. This helpdesk is for the Cytoscape java application.

I see. Is the JSON-format  accepted by the Cytoscape Desktop Application the same / very similar to what js.cytoscape accepts?

Cheers,

Piet

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[piet molenaar]

Yes, the json format can be imported into the Cytoscape desktop app. You can also save your session from Cytoscape desktop as a cytoscape.js web application.

 

Cheers,

Piet

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--

Piet Molenaar
piet...@gmail.com
Department of Oncogenomics, M1-131
Academic Medical Center
University of Amsterdam
Meibergdreef 9
1105 AZ Amsterdam
the Netherlands

tel (+31) 20-5666592
fax (+31) 20-6918626

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[Kei]

The minimal example of Cytoscape.js network is something like:

{

  data: {name: "network-name"},

  elements: {

    nodes: [],

    edges: []

  }

} 

and you can add nodes:

{

  data: { id: "A"}

}

and edges:

{

  data: {source: "A", target: "B"}

}

so it should be easy to convert your data even if you have your data in other data format.

Kei

2016年12月2日金曜日 1時35分45秒 UTC-8 Johann Höchtl: