Yeah, multiple hundreds of dollars for a syringe pump is going to blow huge holes in any budget, especially if we need several. Right now the syringe pump we're designing use the ramps system which is like ~$150 for five independent channels, and then maybe 15 bucks for a motor, and then maybe ~20-30 in supplies (i'm guessing), that is still well under a hundred per pump. The ramps board is actually probably way overkill and we may want to think about how we could go even cheaper.
If you want to go to the ultimate cost limit you could have a board that is just these
http://www.pololu.com/catalog/product/1182, which are the stepper controllers the ramps board uses. I think you can get them assembled for like $8 (in bulk) or so each off of ebay. it looks like each board only needs two control inputs, so you might be able to drive a large number off of a single arduino. so you might be able to get to something like ~$50 per syringe pump. If possible I'd like to have a pump design review on thursday to go over what I've been working on to see if I'm missing anything.