Re: Abridged summary of bio-phylo@googlegroups.com - 1 Message in 1 Topic

[László Nagy]

Hi Rutger,

thanks, but I still cant find how to add characters. I might have not noticed something very basic. Is there something like add_new_character, or a method to add new entry to the matrix?

thanks,
Laszlo

2012/9/12 <bio-...@googlegroups.com>

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• adding new characters to matrix [1 Update]

 adding new characters to matrix

Rutger Vos <rutge...@gmail.com> Sep 12 10:16AM +0100  

Hi László,
 
the list of characters is automatically updated as the matrix
grows/shrinks. This is done by means of a listener subroutine:
Bio::Phylo::Matrices::Matrix::_update_characters()
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[Rutger Vos]

Hi László,

if you add a matrix row that is longer than the current nchar, more
characters will be added. If you want to add characters by hand, you
can do something like:

my $chars = $matrix->get_characters;
my $new_char = $factory->create_character( '-name' => 'myNewChar' );
$chars->insert($new_char);

Hope this helps!

Rutger

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Dr. Rutger A. Vos
Bioinformaticist
NCB Naturalis
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