Problem with BEAST on ubuntu 16

[carlo pacioni]

Hi Everyone,
I'm having trouble to get working BEAST2 on a cloud computer running ubuntu 16. I get the following message, any suggestion?

thanks,
carlo

...
File: RHDV_BDSKY_lognorm.xml seed: 1483134654840 threads: 16
Loading package BEASTLabs v1.7.0
Loading package bModelTest v1.0.0
Loading package MODEL_SELECTION v1.3.4
Loading package phylodynamics v1.2.0
Loading package BEAST_CLASSIC v1.3.0
Loading package BDSKY v1.3.3
Loading package BEASTvntr v0.1.0
Loading package SA v1.1.7
java.lang.UnsatisfiedLinkError: /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libawt_xawt.so: libXtst.so.6: cannot open shared object file: No such file or directory
    at java.lang.ClassLoader$NativeLibrary.load(Native Method)
    at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1941)
    at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1824)
    at java.lang.Runtime.load0(Runtime.java:809)
    at java.lang.System.load(System.java:1086)
    at java.lang.ClassLoader$NativeLibrary.load(Native Method)
    at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1941)
    at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1845)
    at java.lang.Runtime.loadLibrary0(Runtime.java:870)
    at java.lang.System.loadLibrary(System.java:1122)
    at java.awt.Toolkit$3.run(Toolkit.java:1636)
    at java.awt.Toolkit$3.run(Toolkit.java:1634)
    at java.security.AccessController.doPrivileged(Native Method)
    at java.awt.Toolkit.loadLibraries(Toolkit.java:1633)
    at java.awt.Toolkit.<clinit>(Toolkit.java:1668)
    at java.awt.Component.<clinit>(Component.java:593)
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
Library expoTree not found in Phylodynamics lib directory...
Trying java.library.path (set command line argument or copy to run directory
java.lang.UnsatisfiedLinkError: no expoTree in java.library.path
    at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1867)
    at java.lang.Runtime.loadLibrary0(Runtime.java:870)
    at java.lang.System.loadLibrary(System.java:1122)
    at beast.phylodynamics.ExactBDSIS.<clinit>(Unknown Source)
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: java.awt.Container
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: java.awt.Container
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: Could not initialize class java.awt.Toolkit
    at java.awt.Color.<clinit>(Color.java:275)
    at beast.app.util.FileDrop.<clinit>(Unknown Source)
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: Could not initialize class java.awt.Color
    at beast.app.treeannotator.FileDrop.<clinit>(Unknown Source)
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: Could not initialize class java.awt.Color
    at beast.app.draw.Shape.<clinit>(Unknown Source)
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: Could not initialize class beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.Shape
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: Could not initialize class beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: java.awt.Container
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.Shape
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: java.awt.Container
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.Shape
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: java.awt.Container
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: java.awt.Container
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: java.awt.Container
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.InputEditor$Base
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: beast.app.draw.ListInputEditor
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JComponent
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: javax.swing.JPanel
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
java.lang.NoClassDefFoundError: java.awt.Container
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.AddOnManager.find(Unknown Source)
    at beast.util.XMLParserUtils.<clinit>(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)
Exception in thread "main" java.lang.NoClassDefFoundError: javax.swing.JComponent
    at beast.evolution.likelihood.ThreadedTreeLikelihood.listInputs(Unknown Source)
    at beast.core.BEASTObject.getInputs(Unknown Source)
    at beast.core.BEASTInterface.getInput(Unknown Source)
    at beast.util.XMLParser.setInput(Unknown Source)
    at beast.util.XMLParser.createBeastObject(Unknown Source)
    at beast.util.XMLParser.createObject(Unknown Source)
    at beast.util.XMLParser.parseInputs(Unknown Source)
    at beast.util.XMLParser.createObject(Unknown Source)
    at beast.util.XMLParser.parseInputs(Unknown Source)
    at beast.util.XMLParser.createObject(Unknown Source)
    at beast.util.XMLParser.parseInputs(Unknown Source)
    at beast.util.XMLParser.createObject(Unknown Source)
    at beast.util.XMLParser.parseRunElement(Unknown Source)
    at beast.util.XMLParser.parse(Unknown Source)
    at beast.util.XMLParser.parseFile(Unknown Source)
    at beast.app.BeastMCMC.parseArgs(Unknown Source)
    at beast.app.beastapp.BeastMain.main(Unknown Source)

[Remco Bouckaert]

Hi Carlo,

You may try to run in headless mode, like so:

java -Djava.awt.headless=true /path/to/beast.jar




which prevents attempts to open a display, and hopefully to load the libXtst library.

Hope this helps,

Remco

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