I have found this problem when running with the praticular tree prior model. I have changed the operator value of "delta exchange" but it did not work. Is there any problem in the parameter value?
Thanks in advance.
Restoring from file
Start likelihood: -Infinity
P(posterior) = -Infinity (was NaN) **
P(prior) = -Infinity (was NaN) **
P(ExtendedBayesianSkyline.t:Final dataset_FMDV_Asia1) = -Infinity (was NaN) **
P(GammaShapePrior.s:Final dataset_FMDV_Asia1) = -1.448 (was NaN) **
P(indicatorsPrior.alltrees) = -0.69314718056 (was NaN) **
P(popSizePrior.alltrees) = -146.0 (was NaN) **
P(populationMeanPrior.alltrees) = 0.0 (was NaN) **
P(PropInvariantPrior.s:Final dataset_FMDV_Asia1) = 0.0 (was NaN) **
P(RateACPrior.s:Final dataset_FMDV_Asia1) = -3.184008455701433 (was NaN) **
P(RateAGPrior.s:Final dataset_FMDV_Asia1) = -3.1686658147294304 (was NaN) **
P(RateATPrior.s:Final dataset_FMDV_Asia1) = -3.184008455701433 (was NaN) **
P(RateCGPrior.s:Final dataset_FMDV_Asia1) = -3.184008455701433 (was NaN) **
P(RateGTPrior.s:Final dataset_FMDV_Asia1) = -3.184008455701433 (was NaN) **
P(MeanRatePrior.c:Final dataset_FMDV_Asia1) = 0.0 (was NaN) **
P(ucldStdevPrior.c:Final dataset_FMDV_Asia1) = 0.819364145120802 (was NaN) **
P(likelihood) = NaN (was NaN) **
P(treeLikelihood.Final dataset_FMDV_Asia1) = NaN (was NaN) **
Fatal exception: Could not find a proper state to initialise. Perhaps try another seed.
java.lang.RuntimeException: Could not find a proper state to initialise. Perhaps try another seed.
at beast.inference.PathSamplingStep.run(Unknown Source)
at beast.app.BeastMCMC.run(Unknown Source)
at beast.app.beastapp.BeastMain.<init>(Unknown Source)
at beast.app.beastapp.BeastMain.main(Unknown Source)
Fatal exception: Could not find a proper state to initialise. Perhaps try another seed.
java.lang.RuntimeException: An error was encounted. Terminating BEAST
at beast.app.util.ErrorLogHandler.publish(Unknown Source)
at java.util.logging.Logger.log(Unknown Source)
at java.util.logging.Logger.doLog(Unknown Source)
at java.util.logging.Logger.log(Unknown Source)
at java.util.logging.Logger.severe(Unknown Source)
at beast.app.beastapp.BeastMain.<init>(Unknown Source)
at beast.app.beastapp.BeastMain.main(Unknown Source)
Loading /tmp/step0/likelihood.log, burnin 50%, skipping 500 log lines
|---------|---------|---------|---------|---------|---------|---------|---------|
***********************************************************************************
Calculating statistics
|---------|---------|---------|---------|---------|---------|---------|---------|
********************************************************************************
marginalLs[0 ] = -14407.128347275051
\tmp\step1\likelihood.log (The system cannot find the file specified)