Divergence time estimate error

[Josh Brindley]

Hey y'all,

I am new to beast and am trying to run a divergence time estimate. I have been trying to trouble shoot an error and am having no luck. This is my error:

File: LoasaceaeDiv_RelLogNorm.xml seed: 1429985606818 threads: 1

  Ignoring ambiguities in tree likelihood.

  With 936 unique site patterns.

  Using rescaling scheme : dynamic

  Using BEAGLE version: 2.1 resource 0: CPU

    with instance flags:  PRECISION_DOUBLE COMPUTATION_SYNCH EIGEN_REAL SCALING_MANUAL SCALERS_RAW VECTOR_SSE THREADING_NONE PROCESSOR_CPU FRAMEWORK_CPU

Start likelihood: -Infinity after 10 initialisation attempts

P(posterior) = -Infinity (was NaN)

P(prior) = -Infinity (was NaN)

P(FBD.t:alignment_edited) = -Infinity (was NaN)

P(diversificationRatePriorFBD.t:alignment_edited) = -1.8862943611198906 (was NaN)

P(GammaShapePrior.s:alignment_edited) = -1.0 (was NaN)

P(KappaPrior.s:alignment_edited) = -1.8653600339742873 (was NaN)

P(originPriorFBD.t:alignment_edited) = -Infinity (was NaN)

P(HyperPrior.hyperLogNormalDistributionModel-M-originPriorFBD.t:alignment_edited) = -2.1400661634962708 (was NaN)

P(samplingProportionPriorFBD.t:alignment_edited) = 0.4054651081081638 (was NaN)

P(turnoverPriorFBD.t:alignment_edited) = 0.0 (was NaN)

P(MeanRatePrior.c:alignment_edited) = -2.402585092994046 (was NaN)

P(ucldStdevPrior.c:alignment_edited) = 0.819364145120802 (was NaN)

P(Hydrangea_knowltonii) = NaN (was NaN)

P(Jamesia_caplanii.prior) = NaN (was NaN)

P(Philadelphus_creedensis.prior) = NaN (was NaN)

P(likelihood) = NaN (was NaN)

P(treeLikelihood.alignment_edited) = NaN (was NaN)

java.lang.Exception: Could not find a proper state to initialise. Perhaps try another seed.

at beast.core.MCMC.run(Unknown Source)

at beast.app.BeastMCMC.run(Unknown Source)

at beast.app.beastapp.BeastMain.<init>(Unknown Source)

at beast.app.beastapp.BeastMain.main(Unknown Source)

at beast.app.beastapp.BeastLauncher.main(Unknown Source)

Any help pin pointing the issue would be greatly appreciated. I have also attached my .xml file. Thank you!

Cheers,

Josh