fullStackComposeBuild error

wenq...@gmail.com

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Oct 20, 2021, 11:02:43 PM10/20/21

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Hi,

I reinstalled Ubuntu and JDK, but got errors, could you please help!

./gradlew fullStackComposeBuild fullStackComposeUp

FAILURE: Build failed with an exception.

* Where:

Settings file '/home/fullerlab/xnat-docker-compose/settings.gradle'

* What went wrong:

Could not compile settings file '/home/fullerlab/xnat-docker-compose/settings.gradle'.

> startup failed:

General error during semantic analysis: Unsupported class file major version 61

Thank you,

Renjie

Herrick, Rick

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Oct 21, 2021, 12:24:43 AM10/21/21

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You have Java 17 (that’s the “Unsupported class file major version 61”) installed. Gradle is trying to build the project defined in settings.gradle and build.gradle (which are really just Groovy files), but Gradle isn’t compatible with Java 17. Uninstall Java 17 and try Java 8 or Java 11, which are the LTS versions of Java before 17.

--

Rick Herrick

Sr. Programmer/Analyst

Neuroinformatics Research Group

Washington University School of Medicine

Phone: +1 (314) 273-1645

From: xnat_di...@googlegroups.com <xnat_di...@googlegroups.com> on behalf of wenq...@gmail.com <wenq...@gmail.com>
Date: Wednesday, October 20, 2021 at 10:02 PM
To: xnat_discussion <xnat_di...@googlegroups.com>
Subject: [XNAT Discussion] fullStackComposeBuild error

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wenq...@gmail.com

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Oct 21, 2021, 11:54:28 AM10/21/21

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Hi Rick ,

Thanks a lot!

Renjie

wenq...@gmail.com

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Oct 21, 2021, 3:30:53 PM10/21/21

to xnat_discussion

Hi Rick,

While installed java 11, I got errors as:

fullerlab@W10D-4KM8KD3:~/xnat-docker-compose$ ./gradlew fullStackComposeBuild fullStackComposeUp

> Task :fullStackComposeBuild FAILED

--no-ansi option is deprecated and will be removed in future versions. Use `--ansi never` instead.

[2374] Failed to execute script docker-compose

Traceback (most recent call last):

File "urllib3/connectionpool.py", line 677, in urlopen

File "urllib3/connectionpool.py", line 392, in _make_request

File "http/client.py", line 1277, in request

File "http/client.py", line 1323, in _send_request

File "http/client.py", line 1272, in endheaders

File "http/client.py", line 1032, in _send_output

File "http/client.py", line 972, in send

File "docker/transport/unixconn.py", line 43, in connect

PermissionError: [Errno 13] Permission denied

During handling of the above exception, another exception occurred:

Traceback (most recent call last):

File "requests/adapters.py", line 449, in send

File "urllib3/connectionpool.py", line 727, in urlopen

File "urllib3/util/retry.py", line 410, in increment

File "urllib3/packages/six.py", line 734, in reraise

File "urllib3/connectionpool.py", line 677, in urlopen

File "urllib3/connectionpool.py", line 392, in _make_request

File "http/client.py", line 1277, in request

File "http/client.py", line 1323, in _send_request

File "http/client.py", line 1272, in endheaders

File "http/client.py", line 1032, in _send_output

File "http/client.py", line 972, in send

File "docker/transport/unixconn.py", line 43, in connect

urllib3.exceptions.ProtocolError: ('Connection aborted.', PermissionError(13, 'Permission denied'))

During handling of the above exception, another exception occurred:

Traceback (most recent call last):

File "docker/api/client.py", line 214, in _retrieve_server_version

File "docker/api/daemon.py", line 181, in version

File "docker/utils/decorators.py", line 46, in inner

File "docker/api/client.py", line 237, in _get

File "requests/sessions.py", line 543, in get

File "requests/sessions.py", line 530, in request

File "requests/sessions.py", line 643, in send

File "requests/adapters.py", line 498, in send

requests.exceptions.ConnectionError: ('Connection aborted.', PermissionError(13, 'Permission denied'))

During handling of the above exception, another exception occurred:

Traceback (most recent call last):

File "docker-compose", line 3, in <module>

File "compose/cli/main.py", line 81, in main

File "compose/cli/main.py", line 200, in perform_command

File "compose/cli/command.py", line 70, in project_from_options

File "compose/cli/command.py", line 153, in get_project

File "compose/cli/docker_client.py", line 43, in get_client

File "compose/cli/docker_client.py", line 170, in docker_client

File "docker/api/client.py", line 197, in __init__

File "docker/api/client.py", line 222, in _retrieve_server_version

docker.errors.DockerException: Error while fetching server API version: ('Connection aborted.', PermissionError(13, 'Permission denied'))

FAILURE: Build failed with an exception.

* What went wrong:

Execution failed for task ':fullStackComposeBuild'.

> Exit-code 255 when calling docker-compose, stdout:

* Try:

Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights.

* Get more help at https://help.gradle.org

BUILD FAILED in 1s

3 actionable tasks: 1 executed, 2 up-to-date

fullerlab@W10D-4KM8KD3:~/xnat-docker-compose$

On Wednesday, October 20, 2021 at 11:24:43 PM UTC-5 Rick Herrick wrote:

wenq...@gmail.com

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Oct 25, 2021, 11:53:17 AM10/25/21

to xnat_discussion

Hi Rick,

I got the errors as below:

fullerlab@W10D-4KM8KD3:~/xnat-docker-compose$ sudo ./gradlew fullStackComposeBuild fullStackComposeUp

[sudo] password for fullerlab:

Starting a Gradle Daemon (subsequent builds will be faster)

> Task :fullStackComposeBuild

Use 'docker scan' to run Snyk tests against images to find vulnerabilities and learn how to fix them

> Task :fullStackComposeUp

Use 'docker scan' to run Snyk tests against images to find vulnerabilities and learn how to fix them

xnat-traefik Pulling

xnat-smtp Pulling

xnat-activemq Pulling

7dcf5a444392 Pulling fs layer

9eebba75a87f Pulling fs layer

1f0440d87cc7 Pulling fs layer

dacd0555c1b4 Pulling fs layer

b0f19aa05a94 Pulling fs layer

9fa6897f5432 Pulling fs layer

0f986ed9e7e7 Pulling fs layer

75a8f61a71ca Pulling fs layer

50db804f83a0 Pulling fs layer

e3d0ff839c33 Pulling fs layer

8e3cb309021f Pulling fs layer

9a1585ec1312 Pulling fs layer

a242633f1554 Pulling fs layer

8e3cb309021f Waiting

0f986ed9e7e7 Waiting

75a8f61a71ca Waiting

50db804f83a0 Waiting

e3d0ff839c33 Waiting

a242633f1554 Waiting

9a1585ec1312 Waiting

b0f19aa05a94 Waiting

9fa6897f5432 Waiting

dacd0555c1b4 Waiting

a0d0a0d46f8b Pulling fs layer

d5295d3cd66d Pulling fs layer

709a291a928e Pulling fs layer

2367d83d5091 Pulling fs layer

a0d0a0d46f8b Waiting

2367d83d5091 Waiting

d5295d3cd66d Waiting

709a291a928e Waiting

1f0440d87cc7 Downloading [==================================================>] 511B/511B

1f0440d87cc7 Verifying Checksum

1f0440d87cc7 Download complete

9eebba75a87f Downloading [=> ] 658B/21.66kB

9eebba75a87f Downloading [==================================================>] 21.66kB/21.66kB

9eebba75a87f Download complete

7dcf5a444392 Downloading [> ] 519.4kB/51.07MB

7dcf5a444392 Downloading [====> ] 4.664MB/51.07MB

7dcf5a444392 Downloading [=========> ] 9.325MB/51.07MB

7dcf5a444392 Downloading [==============> ] 14.53MB/51.07MB

dacd0555c1b4 Downloading [================================================> ] 660B/681B

dacd0555c1b4 Downloading [==================================================>] 681B/681B

dacd0555c1b4 Download complete

7dcf5a444392 Downloading [==================> ] 19.2MB/51.07MB

b0f19aa05a94 Downloading [> ] 539kB/55.76MB

7dcf5a444392 Downloading [=====================> ] 22.33MB/51.07MB

b0f19aa05a94 Downloading [==> ] 2.669MB/55.76MB

7dcf5a444392 Downloading [=======================> ] 24.41MB/51.07MB

b0f19aa05a94 Downloading [====> ] 4.811MB/55.76MB

b0f19aa05a94 Downloading [======> ] 6.962MB/55.76MB

7dcf5a444392 Downloading [==========================> ] 26.98MB/51.07MB

b0f19aa05a94 Downloading [========> ] 9.644MB/55.76MB

7dcf5a444392 Downloading [============================> ] 29.55MB/51.07MB

b0f19aa05a94 Downloading [==========> ] 11.78MB/55.76MB

7dcf5a444392 Downloading [==============================> ] 31.64MB/51.07MB

b0f19aa05a94 Downloading [============> ] 13.91MB/55.76MB

7dcf5a444392 Downloading [================================> ] 33.7MB/51.07MB

9fa6897f5432 Downloading [> ] 253.1kB/24.05MB

7dcf5a444392 Downloading [===================================> ] 35.78MB/51.07MB

b0f19aa05a94 Downloading [==============> ] 16.08MB/55.76MB

9fa6897f5432 Downloading [==> ] 1.244MB/24.05MB

7dcf5a444392 Downloading [====================================> ] 37.35MB/51.07MB

b0f19aa05a94 Downloading [===============> ] 17.67MB/55.76MB

9fa6897f5432 Downloading [=====> ] 2.71MB/24.05MB

7dcf5a444392 Downloading [======================================> ] 38.91MB/51.07MB

b0f19aa05a94 Downloading [=================> ] 19.28MB/55.76MB

9fa6897f5432 Downloading [=========> ] 4.447MB/24.05MB

b0f19aa05a94 Downloading [==================> ] 20.88MB/55.76MB

9fa6897f5432 Downloading [============> ] 5.921MB/24.05MB

7dcf5a444392 Downloading [========================================> ] 40.98MB/51.07MB

b0f19aa05a94 Downloading [====================> ] 22.49MB/55.76MB

9fa6897f5432 Downloading [===============> ] 7.408MB/24.05MB

7dcf5a444392 Downloading [=========================================> ] 42.53MB/51.07MB

b0f19aa05a94 Downloading [=====================> ] 24.1MB/55.76MB

9fa6897f5432 Downloading [==================> ] 8.895MB/24.05MB

7dcf5a444392 Downloading [===========================================> ] 44.09MB/51.07MB

9fa6897f5432 Downloading [=====================> ] 10.37MB/24.05MB

b0f19aa05a94 Downloading [=======================> ] 25.72MB/55.76MB

7dcf5a444392 Downloading [============================================> ] 45.65MB/51.07MB

9fa6897f5432 Downloading [=========================> ] 12.08MB/24.05MB

b0f19aa05a94 Downloading [========================> ] 27.86MB/55.76MB

7dcf5a444392 Downloading [==============================================> ] 47.74MB/51.07MB

9fa6897f5432 Downloading [============================> ] 13.79MB/24.05MB

b0f19aa05a94 Downloading [==========================> ] 30MB/55.76MB

7dcf5a444392 Downloading [================================================> ] 49.83MB/51.07MB

9fa6897f5432 Downloading [===============================> ] 15.28MB/24.05MB

7dcf5a444392 Download complete

b0f19aa05a94 Downloading [============================> ] 31.6MB/55.76MB

0f986ed9e7e7 Downloading

0f986ed9e7e7 Retrying in 5 seconds

9fa6897f5432 Downloading [===================================> ] 17.26MB/24.05MB

b0f19aa05a94 Downloading [==============================> ] 34.28MB/55.76MB

7dcf5a444392 Extracting [> ] 524.3kB/51.07MB

9fa6897f5432 Downloading [========================================> ] 19.48MB/24.05MB

9fa6897f5432 Downloading [=============================================> ] 21.71MB/24.05MB

b0f19aa05a94 Downloading [=================================> ] 36.96MB/55.76MB

7dcf5a444392 Extracting [===> ] 3.67MB/51.07MB

xnat-smtp Error

Error response from daemon: Head "https://registry-1.docker.io/v2/freinet/postfix-relay/manifests/latest": dial tcp: lookup registry-1.docker.io on 192.168.65.5:53: no such host

> Task :fullStackComposeUp FAILED

FAILURE: Build failed with an exception.

* What went wrong:

Execution failed for task ':fullStackComposeUp'.

> Exit-code 18 when calling docker-compose, stdout: N/A

* Try:

Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights.

* Get more help at https://help.gradle.org

BUILD FAILED in 17s

4 actionable tasks: 2 executed, 2 up-to-date

fullerlab@W10D-4KM8KD3:~/xnat-docker-compose$

Thank you,

Renjie

On Wednesday, October 20, 2021 at 11:24:43 PM UTC-5 Rick Herrick wrote:

Herrick, Rick

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Oct 26, 2021, 6:01:44 PM10/26/21

to xnat_di...@googlegroups.com

That’s a network error. I have no idea what it indicates because it’s something local:

dial tcp: lookup registry-1.docker.io on 192.168.65.5:53: no such host

All IP addresses that start with “192.168” are on private networks, so for some reason registry-1.docker.io is resolving to a local IP. By default, Docker uses the subnets 172.17.0.0/16 and 172.18.0.0/16 (maybe others, but they’re all 172.something; I think they might vary based on the network mode, e.g. bridge vs host, but I’m not sure).

It’s strange that it worked for those other containers but not for the postfix container, so I’d guess it was just a transient networking issue, but I’m not really sure.

--

Rick Herrick

XNAT Architect/Developer

Computational Imaging Laboratory

Washington University School of Medicine

To view this discussion on the web visit https://groups.google.com/d/msgid/xnat_discussion/0123f7d0-52b0-4aa3-b7d2-312e7054f251n%40googlegroups.com.

wenq...@gmail.com

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Nov 2, 2021, 10:22:16 AM11/2/21

to xnat_discussion

Hi Rick,

Many thanks!

Renjie

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