random site effects in occuTTD ?

14 views
Skip to first unread message

Marc Kery

unread,
Jan 14, 2026, 8:13:16 AM (2 days ago) Jan 14
to unma...@googlegroups.com
Dear Ken,

does occuTTD support additional random effects through TMB ? I have a data set with multiple observations from the same set of sites and would ideally accommodate possible non-independence of the data from the same site by adding a site random effect, as in + (1 | site).

Thanks and best regards  --- Marc 

Ken Kellner

unread,
Jan 14, 2026, 8:51:46 AM (2 days ago) Jan 14
to unma...@googlegroups.com
Hi Marc,

Unfortunately occuTTD does not yet support TMB/random effects. However you could try fitting the model in ubms with stan_occuTTD, which does allow random effects.

Ken
> --
> *** Three hierarchical modeling email lists ***
> (1) unmarked (this list): for questions specific to the R package unmarked
> (2) SCR: for design and Bayesian or non-bayesian analysis of spatial capture-recapture
> (3) HMecology: for everything else, especially material covered in the books by Royle & Dorazio (2008), Kéry & Schaub (2012), Kéry & Royle (2016, 2021) and Schaub & Kéry (2022)
> ---
> You received this message because you are subscribed to the Google Groups "unmarked" group.
> To unsubscribe from this group and stop receiving emails from it, send an email to unmarked+u...@googlegroups.com.
> To view this discussion visit https://groups.google.com/d/msgid/unmarked/ZR0P278MB08690BCF5400431D718893D0EB8FA%40ZR0P278MB0869.CHEP278.PROD.OUTLOOK.COM.

Marc Kery

unread,
Jan 14, 2026, 9:01:39 AM (2 days ago) Jan 14
to unma...@googlegroups.com
Dear Ken,

thanks a lot for the quick info. And yes, of course, ubms is then the way to go.

Best regards  -- Marc


From: unma...@googlegroups.com <unma...@googlegroups.com> on behalf of Ken Kellner <con...@kenkellner.com>
Sent: Wednesday, January 14, 2026 14:51
To: unma...@googlegroups.com <unma...@googlegroups.com>
Subject: Re: [unmarked] random site effects in occuTTD ?
 

Marc Kery

unread,
Jan 14, 2026, 10:10:37 AM (2 days ago) Jan 14
to unma...@googlegroups.com
Darn, Ken, I just found out that I had asked you the EXACT SAME QUESTION about 14 months ago .... sorry 🙁

Thanks for bearing with me.... Marc


From: unma...@googlegroups.com <unma...@googlegroups.com> on behalf of Marc Kery <marc...@vogelwarte.ch>
Sent: Wednesday, January 14, 2026 15:01
Reply all
Reply to author
Forward
0 new messages