I was a bit surprise to see that functional connectivity is so different than structural connectivity plot and it looks so random... Why is that the case? Am I doing something wrong here?
I expected to see more network-like structure on the left handside of above plot. I tried various values of linear coupling (high 0.1 and low 1e-4) and every time I get similar plot.
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>> sim.initial_conditions = (0.001)*np.ones((1, 1, nregions, 1))
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hi
There is a lot of fine print in these papers, beyond initial conditions. For example, there is frequently an averaged connectome being used, which boosts the results strongly. The FC correlations are being z scored, etc. All of these have to been applied
in order to make a proper comparison.
By contrast, the default connectome in TVB is a tracer study, and it does not produce high correlations as easily as this paper makes it look. This is neither positive or negative: they are just different data and methods, and what one should focus on is
the sensitivity of this empirical-simulated FC relation with respect to your parameters of interest.
cheers,
Marmaduke Woodman,
TVB Engineer, INS AMU; +33
4 91 32 42 38 +33 7 67 77 84 72
Le 3 oct. 2021 à 17:25, JIAQI ZHANG <smile.z...@gmail.com> a écrit :
Hi! I'm new to TVB and I have a really easy question. How can I decide which parameter is the critical point and get the value of critical point of different models in TVB?
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