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Hi,
I was trying to use TPP 6.0 for an XTandem search, but the Tandem2XML failed. It said "Unsupported search enzyme". My enzyme was trypsin/P, so I set the cleavage site as [KR]|[X]) How can I solve this problem? Thank you!
Farshad Abdollah-Nia
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Mar 10, 2022, 10:31:11 PM3/10/22
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I am wondering why conversion to pepXML needs to restrict the search enzyme in any way, given that the search is completely carried out by XTandem. Could someone explain please?