dev version installation

[Simone Codeluppi]

Hi

I tried to install the dev version (0.12x) on anaconda using the command posted on the website : git clone https://github.com/scikit-image/scikit-image.git

followed by git pull and compiling of the modified extensions I still get:  0.11.dev0

Any idea on what i can be doing wrong?

Thanks a lot for the help!

Simone

[Josh Warner]

It sounds like you're compiling inplace but not informing your preferred Python installation about the package.

After compiling, have you run `python setup.py develop`? That might solve everything, assuming `python` maps to your preferred Anaconda environment. It compiles what's needed, then adds the path to your PYTHONPATH so you can develop and use the source install outside Python's site_packages directory.

Let us know if that doesn't work,

Josh

[Simone Codeluppi]

Hi 

thanks for the help but it didn't change anything....still 0.11dev

Simone

[Stéfan van der Walt]

On 1 February 2016 at 06:11, Simone Codeluppi <sim...@codeluppi.org> wrote:
> thanks for the help but it didn't change anything....still 0.11dev

Can you please send the output of

$ git log HEAD^...

from the git repo you cloned, as well as

$ python -c "import skimage; print(skimage)"

from your home directory?

Thanks,
Stéfan

[Simone Codeluppi]

Hi

here are the outputs:

from $ python -c "import skimage; print(skimage)"  I get

<module 'skimage' from '/Users/simone/Google Drive/Programming/git-repo/Cloned_repos/scikit-image/skimage/__init__.pyc'>

(skimage_dev)

from $ git log HEAD^... I get:

commit 13f9b89023feabe3f7d8b4bc7e4e309a1bca8686

Merge: b6a1bcd 4c781cf

Author: Stefan van der Walt <sjvd...@gmail.com>

Date:   Wed Jan 28 13:31:25 2015 -0800

    Merge pull request #1319 from ahojnnes/geom-est

    

    Improve conditioning of geometric transformations

commit 4c781cf5c015ab3d1155d83626a6ec437ac18339

Author: Johannes Schönberger <js...@demuc.de>

Date:   Thu Jan 22 07:23:54 2015 -0500

    Fix doc string

commit ad85dfabd57f55c8cabef5dbfe7e757f96ec677b

Author: Johannes Schönberger <js...@demuc.de>

Date:   Thu Jan 22 06:49:16 2015 -0500

    Disable catch of all warnings, return nan params instead

commit acf68c6d7c0bd49aadc46e86d8082f0b231cc54c

Author: Johannes Schönberger <js...@demuc.de>

Date:   Fri Dec 26 12:41:03 2014 +0100

    Add new parameter to catch exceptions during RANSAC

commit 91c697c5f79984b77aae1927a559c1884181c546

Author: Johannes Schönberger <js...@demuc.de>

Date:   Wed Dec 24 17:28:44 2014 +0100

    Handle special case of 1 pixel image

commit 5dbb6e325795aef4c160962f09fe64d8989069a4

Author: Johannes Schönberger <js...@demuc.de>

Date:   Wed Dec 24 15:27:10 2014 +0100

    Improve conditioning of silimarity transform design matrix

commit 983919404f90fdc489f9adfef10d9b04e95bd3b4

Author: Johannes Schönberger <js...@demuc.de>

Date:   Wed Dec 24 15:24:34 2014 +0100

    Improve conditioning of homography design matrix

commit 2f60de736295fccc7f0f360a4f705d1d03f8b1df

Author: Johannes Schönberger <js...@demuc.de>

Date:   Wed Dec 24 15:19:58 2014 +0100

    Create function to center and normalize image points

Thanks for the help!

Simone

[Simone Codeluppi]

Hi Stefa

I re-run the installation and this time the dev 0.12 got installed.

Maybe there was something wrong with the installation I did before.

Thanks for the help

Simone

On Monday, February 1, 2016 at 9:09:09 PM UTC-8, stefanv wrote:

[Stéfan van der Walt]

On 2 February 2016 at 13:21, Simone Codeluppi <sim...@codeluppi.org> wrote:
> from $ git log HEAD^... I get:

This output is a bit strange, so perhaps try:

$ git checkout master
$ git fetch
$ git reset --hard origin/master

Stéfan

[Raphael Okoye]

hi all,

 I need help with installation of  the latest version of scikit image(the version I have is 0.11.3 kindly find attached). I currently run Ubuntu 14.04 LTS. I'm not sure if   sudo apt-get build-dep python-scikit-image     is the way to go.  Any guidance will be highly appreciated. 

Thank you.

Raphael

[Raphael Okoye]

I forgot to mention that I run Python 3.4.3. Thanks

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[Vighnesh Birodkar]

Hello Raphael

Instructions for installing the development version can be found here:

http://scikit-image.org/docs/stable/install.html#running-the-development-version

[Raphael Okoye]

Thanks a lot Vighnesh. Over the weekend I installed  version 0.12.3

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