Building sage 9.0 fails in Centos 8

[Aria Shahverdi]

Hi,

I got the 'sage-9.0-Debian_GNU_Linux_10-x86_64.tar.bz2' from the website and am trying to install it on Centos 8. (I previously did the same procedure for sage 8.9 and it was successful).

There is error in the begining of make file in the following files

1. last couple of lines of sagelib-9.0.log

/usr/bin/ld: cannot find crti.o: No such file or directory
collect2: error: ld returned 1 exit status
g++ -pthread -shared -L/home/aria/sage-9.0/local/lib -Wl,-rpath,/home/aria/sage-9.0/local/lib -L. -L/home/aria/sage-9.0/local/lib -Wl,-rpath,/home/aria/sage-9.0/local/lib -L/home/aria/sage-9.0/local/lib -Wl,-rpath,/home/aria/sage-9.0/local/lib build/temp.linux-x86_64-3.7/build/cythonized/sage/symbolic/ring.o -L/home/aria/sage-9.0/local/lib -L/home/aria/sage-9.0/local/lib -lgmp -lpynac -lstdc++ -lpython3.7m -o build/lib.linux-x86_64-3.7/sage/symbolic/ring.cpython-37m-x86_64-linux-gnu.so
/usr/bin/ld: cannot find crti.o: No such file or directory
collect2: error: ld returned 1 exit status
g++ -pthread -shared -L/home/aria/sage-9.0/local/lib -Wl,-rpath,/home/aria/sage-9.0/local/lib -L. -L/home/aria/sage-9.0/local/lib -Wl,-rpath,/home/aria/sage-9.0/local/lib -L/home/aria/sage-9.0/local/lib -Wl,-rpath,/home/aria/sage-9.0/local/lib build/temp.linux-x86_64-3.7/build/cythonized/sage/symbolic/expression.o -L/home/aria/sage-9.0/local/lib -L/home/aria/sage-9.0/local/lib -lgmp -lpynac -lstdc++ -lpython3.7m -o build/lib.linux-x86_64-3.7/sage/symbolic/expression.cpython-37m-x86_64-linux-gnu.so -lpari
/usr/bin/ld: cannot find crti.o: No such file or directory
collect2: error: ld returned 1 exit status
error: command 'g++' failed with exit status 1
make[4]: *** [Makefile:33: sage] Error 1
make[4]: Leaving directory '/home/aria/sage-9.0/src'

real    31m9.136s
user    113m32.482s
sys    2m13.602s

2. last couple of lines of yasm-1.3.0.p0.log

checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... no
configure: error: in `/home/aria/sage-9.0/local/var/tmp/sage/build/yasm-1.3.0.p0/src':
configure: error: C compiler cannot create executables
See `config.log' for more details
********************************************************************************
Error configuring yasm-1.3.0.p0
See the file
    /home/aria/sage-9.0/local/var/tmp/sage/build/yasm-1.3.0.p0/src/config.log
for details.
********************************************************************************

real    0m0.568s
user    0m0.314s
sys    0m0.272s
************************************************************************
Error installing package yasm-1.3.0.p0
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the log file
  /home/aria/sage-9.0/logs/pkgs/yasm-1.3.0.p0.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/home/aria/sage-9.0/local/var/tmp/sage/build/yasm-1.3.0.p0 and type 'make' or whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
  (cd '/home/aria/sage-9.0/local/var/tmp/sage/build/yasm-1.3.0.p0' && '/home/aria/sage-9.0/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************

I have tried to remove yasm and do make again but I got error as well. I appreciate it if anyone can help me figure out what is going on.

[Dima Pasechnik]

On Wed, 15 Jan 2020, 16:44 Aria Shahverdi, <ari...@gmail.com> wrote:

Hi,

I got the 'sage-9.0-Debian_GNU_Linux_10-x86_64.tar.bz2' from the website and am trying to install it on Centos 8. (I previously did the same procedure for sage 8.9 and it was successful).

There is error in the begining of make file in the following files

1. last couple of lines of sagelib-9.0.log

Are you building from source? 

You might have better luck using the source tarball - or at least we would be more sure that errors you get are not side effects of using a binary tarball.

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[Aria Shahverdi]

Thanks, Yes the portable edition is working fine. I am trying to build from source and that is when it causes the problem.

I looked more and it seems there is an issue with gcc and it tries to build gcc although I have gcc-8.3

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[Dima Pasechnik]

typically this happens if you don't have g++ and gfortran installed on your 

system.

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[Aria Shahverdi]

I just updated gcc, g++ and gfortran to 9.2.0 but ./configure still can not detect gcc but it detects gfortran.

    gcc-9.2.0
    gdb-8.2
    gf2x-1.2.p0
    gfan-0.6.2.p1
    gfortran-9.2.0 will not be installed (configure check)

Also forcing  i.e. ./configure --with-system-gcc , does not seem to help as well.

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[Dima Pasechnik]

try running

   make distclean

and then

  ./configure

again. If this doesn't help, post

config.log

here

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[Aria Shahverdi]

Thanks, using what you suggested worked and now sage-9.0 is installed.

Thanks.

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