Building SAGE 9.0 on openSUSE (Leap 15.1) fails at scipy

[Mikhail Malakhaltsev]

Dear colleagues, 

I have the following problem.

The compilation of SAGE 9.0 from source is terminated by

*********************************************************************

[scipy-1.2.0]     Fatal Error: error writing to /tmp/ccIBG4L0.s: No space left on device

[scipy-1.2.0]     compilation terminated.

[scipy-1.2.0]     gfortran:f77: scipy/fftpack/src/dfftpack/zffti1.f

[scipy-1.2.0]     scipy/fftpack/src/dfftpack/dfftf1.f:62:0:

[scipy-1.2.0] 

[scipy-1.2.0]            END

[scipy-1.2.0] 

[scipy-1.2.0]     Fatal Error: error writing to /tmp/ccfIV1qY.s: No space left on device

[scipy-1.2.0]     compilation terminated.

[scipy-1.2.0]     scipy/fftpack/src/dfftpack/zfftb1.f:64:0:

[scipy-1.2.0] 

[scipy-1.2.0]            END

[scipy-1.2.0] 

[scipy-1.2.0]     Fatal Error: error writing to /tmp/cc7a1xUc.s: No space left on device

[scipy-1.2.0]     compilation terminated.

[scipy-1.2.0]     scipy/fftpack/src/dfftpack/zfftf1.f:64:0:

[scipy-1.2.0] 

[scipy-1.2.0]            END

[scipy-1.2.0] 

[scipy-1.2.0]     Fatal Error: error writing to /tmp/cc9ZGXMf.s: No space left on device

[scipy-1.2.0]     compilation terminated.

[scipy-1.2.0]     error: Command "gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops -I/home/prince_add/sage-9.0/local/lib/python3.7/site-packages/numpy/core/include -c -c scipy/fftpack/src/dfftpack/dfftb1.f -o build/temp.linux-x86_64-3.7/scipy/fftpack/src/dfftpack/dfftb1.o" failed with exit status 1

[scipy-1.2.0]     Running setup.py install for scipy: finished with status 'error'

********************************************************************************************

I do not understand what is the problem because /dev/root with subdirectory /tmp has 23G free, and the device where I am building SAGE has 212 G free.

Can you help me?

[Dima Pasechnik]

Probably your /tmp is not where you think it is.
Could you post the output of the shell command

df -h

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[Mikhail Malakhaltsev]

>Probably your /tmp is not where you think it is.

>Could you post the output of the shell command

>df -h

You are right, Dima.

The output is

**************************************

Filesystem      Size  Used Avail Use% Mounted on

devtmpfs        9.8G     0  9.8G   0% /dev

tmpfs           9.8G   98M  9.7G   1% /dev/shm

tmpfs           9.8G  9.8M  9.8G   1% /run

tmpfs           9.8G     0  9.8G   0% /sys/fs/cgroup

/dev/sda7        40G   15G   23G  39% /

/dev/sda1       360M  5.0M  355M   2% /boot/efi

/dev/sda2       124M  1.7M  116M   2% /tmp

/dev/sda8       538G  410G  128G  77% /home

/dev/sda3       322G   95G  212G  31% /home/prince_add

tmpfs           2.0G   20K  2.0G   1% /run/user/461

tmpfs           2.0G   36K  2.0G   1% /run/user/1000

********************************************

So /tmp is mounted to /dev/sda2 with only 124M :(

However, up to now I had no problem with it.

So can I leave /tmp as is but change some variable for the compilation process use another space?

Thank you very much.

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[Mikhail Malakhaltsev]

I have set the variable TMPDIR  to a directory with sufficient space, and the compilation of scipy was successfull.

Thank you very much, Dima!