Also I can not change the disk size of private.img in the shutdown
personal vm. And maybe others.
What happened to qubes-vm manager?
-> Disk got full and maybe, it could not write configs correncty
-> I deleted some not needed VMs by hand
rm -rf /var/lib/qubes/appvm/some_stupid_appliance in order to get space,
before I started the recovery with the nas and kali linux
so could be, that qubes vm manager did not like this.
How to fix qubes vm manager?!
Also there is a bug in the qubes-vm manager:
The dom0 disk can become full, as one can set a size for private.img that is bigger then the size of dom0 disk!
So if one is not careful, a bigger download in one of the app-vms can render
the qubes-os box unusable and one has to recover the data using kali and mounting the file system images.
Now I know you're talking about Qubes 3.2. here, but this issue might possibly be related to Qubes 4. The Qubes VM Manager was originally planned to be out-phased in Qubes 4 and was supposed to become a relic of the past. But due to many people having an easier time having a visual GUI that the VM Manager provides, the Qubes developers brought it back recently in Qubes 4. However it still needs some updates and fixes before it can run a bit more smooth.
So here's thhe thing. Due to limited time and busy schedules to make everything for Qubes, I suspect that some of the updates designed for Qubes 4 has also arrived and mixed in with Qubes 3.2. to some extent. For example updates in qvm-usb, updates to the Qubes-tools, and so forth.
Now that doesn't mean all packages that resides on both Qubes 3.2. and Qubes 4 are equally updated. All I'm suspecting here, is that "some" might slip through to Qubes 3.2.
Basically, in Qubes 4 the Qubes mechanics has become so different, that the VM-Manager will take major re-work to make it work properly again. However it's already been brought back to a state where it's useful, albeit a bit slow. But the cool thing with the Qubes 4 VM-Manager is that the window now can be re-sized, although it doesn't yet remember the previous window size, but hopefully that's fixed sometime soon.
Either way, this could be a possible explanation, but I'm no expert, and this is only and merely a suspicion. Qubes 4 required a lot of work, and they're not quite done yet either. They're busy with it, and it's probably taken longer than anyone ever expected, although it has brought about some really good results so it's imho been well worth it.
Thing is though, Qubes 3.2. was probably not meant to be around this long, and it might be starting to show. But that's just be postulating, there might be another possible explanation.
But for what it's worth, having used Qubes 4 since RC-2, it's actually become quite stable now. If RC-4 is not out soon, then maybe upgrade to Qubes 4 RC-3? Also updates meant for RC-4 has been posted to Qubes 4 RC-3 current-testing too. Although it reamins to be seen whether a re-install is recommended between RC-3 and the yet to be released RC-4, the developers will tell us on the release day in the release news article, if any of the previous releases procedures is to go by.
Hi, as there is RC-4 of something, it is clever to stick with qubes3.2 until there will be 4.1.
Also I would like to know how the qubes manager works, in order to fix it my self (maybe, I need to edit some XML), if nobody wants to help.