Plot one masked field over seviri IR108
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Thanasis Karagiannidis
Dec 28, 2021, 5:25:25 AM12/28/21
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Dear all
I have the following problem: I want to overlay a masked field (eg seviri WV6.2-IR10.8) on the IR108 field. I attach an older image created with cartopy as an example. I thought that the masking compositor would do the trick, but obviously I do something wrong. So far I have done the following:
in the composites/seviri.yaml
deepconvection:
compositor: !!python/name:satpy.composites.DifferenceCompositor
prerequisites:
- WV_062
- IR_108
standard_name: deepconvection
deepconvection_masked:
compositor: !!python/name:satpy.composites.MaskingCompositor
conditions:
- method: less
value: -4
transparency: 100
prerequisites:
- deepconvection
- deepconvection
standard_name: deepconvection_masked
ir108_deepconvection:
compositor: !!python/name:satpy.composites.GenericCompositor
prerequisites:
- grey_ir108_clouds
compositor: !!python/name:satpy.composites.GenericCompositor
prerequisites:
- deepconvection_masked
standard_name: ir108_deepconvection
and in enchancement/generic.yaml
deepconvection_masked:
standard_name: deepconvection_masked
operations:
- name: colorize
method: !!python/name:satpy.enhancements.colorize
kwargs:
palettes:
- {colors: rdylbu, min_value: -4, max_value: 4}
ir108_deepconvection:
standard_name: ir108_deepconvection
operations:
- name: colorize
method: !!python/name:satpy.enhancements.colorize
kwargs:
palettes:
- {colors: greys, min_value: 253.15, max_value: 303.15}
operations:
- name: colorize
method: !!python/name:satpy.enhancements.colorize
kwargs:
palettes:
- {colors: spectral, min_value: -4, max_value: 4}
Overall, the masking seems to work well but I have trouble applying the overlay of the two fields. Only one of the two fields (the last one) is plotted. I attach an image as an example.
Any help would be appreciated.
Sakis
David Hoese
Dec 30, 2021, 11:26:14 AM12/30/21
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Hi Sakis,
Sorry for the late reply. Most of the maintainers are on holiday this
week. The one thing that stands out immediately is this portion of your
compositor config:
ir108_deepconvection:
compositor: !!python/name:satpy.composites.GenericCompositor
prerequisites:
- grey_ir108_clouds
compositor: !!python/name:satpy.composites.GenericCompositor
prerequisites:
- deepconvection_masked
standard_name: ir108_deepconvection
What are you trying to say here? This looks like one composite
(`ir108_deepconvection`) with two separate compositor definitions (there
should never be more than one compositor or prerequisites entry).
Dave
On 12/28/21 04:17, Thanasis Karagiannidis wrote:
> Dear all
>
> I have the following problem: I want to overlay a masked field (eg
> seviri WV6.2-IR10.8) on the IR108 field. I attach an older image created
> with cartopy as an example. I thought that the masking compositor would
> do the trick, but obviously I do something wrong. So far I have done the
> following:
>
> _in the composites/seviri.yaml_
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Sorry for the late reply. Most of the maintainers are on holiday this
week. The one thing that stands out immediately is this portion of your
compositor config:
ir108_deepconvection:
compositor: !!python/name:satpy.composites.GenericCompositor
prerequisites:
- grey_ir108_clouds
compositor: !!python/name:satpy.composites.GenericCompositor
prerequisites:
- deepconvection_masked
standard_name: ir108_deepconvection
(`ir108_deepconvection`) with two separate compositor definitions (there
should never be more than one compositor or prerequisites entry).
Dave
On 12/28/21 04:17, Thanasis Karagiannidis wrote:
> Dear all
>
> I have the following problem: I want to overlay a masked field (eg
> seviri WV6.2-IR10.8) on the IR108 field. I attach an older image created
> with cartopy as an example. I thought that the masking compositor would
> do the trick, but obviously I do something wrong. So far I have done the
> following:
>
>
> deepconvection:
>
> compositor: !!python/name:satpy.composites.DifferenceCompositor
>
> prerequisites:
>
> - WV_062
>
> - IR_108
>
> standard_name: deepconvection
>
> deepconvection_masked:
>
> compositor: !!python/name:satpy.composites.MaskingCompositor
>
> conditions:
>
> - method: less
>
> value: -4
>
> transparency: 100
>
> prerequisites:
>
> - deepconvection
>
> - deepconvection
>
> standard_name: deepconvection_masked
>
> ir108_deepconvection:
>
> compositor: !!python/name:satpy.composites.GenericCompositor
>
> prerequisites:
>
> - grey_ir108_clouds
>
> compositor: !!python/name:satpy.composites.GenericCompositor
>
> prerequisites:
>
> - deepconvection_masked
>
> standard_name: ir108_deepconvection
>
> _and in enchancement/generic.yaml_
> deepconvection:
>
> compositor: !!python/name:satpy.composites.DifferenceCompositor
>
> prerequisites:
>
> - WV_062
>
> - IR_108
>
> standard_name: deepconvection
>
> deepconvection_masked:
>
> compositor: !!python/name:satpy.composites.MaskingCompositor
>
> conditions:
>
> - method: less
>
> value: -4
>
> transparency: 100
>
> prerequisites:
>
> - deepconvection
>
> - deepconvection
>
> standard_name: deepconvection_masked
>
> ir108_deepconvection:
>
> compositor: !!python/name:satpy.composites.GenericCompositor
>
> prerequisites:
>
> - grey_ir108_clouds
>
> compositor: !!python/name:satpy.composites.GenericCompositor
>
> prerequisites:
>
> - deepconvection_masked
>
> standard_name: ir108_deepconvection
>
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Thanasis Karagiannidis
Dec 31, 2021, 11:44:16 AM12/31/21
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Dear Dave
No problem at all with the "late" reply. It is holidays!
My "
ir108_deepconvection" composite is a failed attempt to solve the problem I described in the beginning of my e-mail and with the images I sent. Overlay one field on another filed.
In the "lower" field I have the IR108 and on top of it the WV62-IR108 difference (the later only if the value of that difference is over -4).
So I though: lets create the difference WV60-IR108 and mask it for values <-4 (done!) and then plot it on top of IR108. But I fail to successfully overlay the two fields. My
"
ir108_deepconvection"is that attempt.
Best regards and a happy new year!
Sakis
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David Hoese
Dec 31, 2021, 4:24:53 PM12/31/21
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Sakis,
Ah ok. So composites can't really be configured that way. A composite
definition has one compositor and one set of prerequisites. What you are
looking for is a "BackgroundCompositor" which should put one image on
top of another. So for your case if you replace your
ir108_deepconvection composite with the following it should work:
ir108_deepconvection:
compositor: !!python/name:satpy.composites.BackgroundCompositor
prerequisites:
- deepconvection_masked
- grey_ir108_clouds
standard_name: ir108_deepconvection
This should make the "grey_ir108_clouds" the background and the
"deepconvection_masked" the foreground. You'll also need to update your
enhancement as they have the same mis-configuration (configuring
multiple enhancements in one enhancement section). You'll need to define
one enhancement for deepconvection_masked which you already have, then
one for grey_ir108_clouds, and then finally a simple one for the overall
ir108_deepconvection composite. So if you replace your
ir108_deepconvection enhancement with:
ir108_deepconvection:
standard_name: ir108_deepconvection
operations:
- name: crude_stretch
method: !!python/name:satpy.enhancements.stretch
kwargs:
palettes:
- {stretch: "crude", min_value: 0.0, max_value: 1.0}
Then it should work, but this assumes you have another section defined
for "grey_ir108_clouds" already. Let me know how it goes.
Dave
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Ah ok. So composites can't really be configured that way. A composite
definition has one compositor and one set of prerequisites. What you are
looking for is a "BackgroundCompositor" which should put one image on
top of another. So for your case if you replace your
ir108_deepconvection composite with the following it should work:
ir108_deepconvection:
compositor: !!python/name:satpy.composites.BackgroundCompositor
prerequisites:
- deepconvection_masked
- grey_ir108_clouds
standard_name: ir108_deepconvection
This should make the "grey_ir108_clouds" the background and the
"deepconvection_masked" the foreground. You'll also need to update your
enhancement as they have the same mis-configuration (configuring
multiple enhancements in one enhancement section). You'll need to define
one enhancement for deepconvection_masked which you already have, then
one for grey_ir108_clouds, and then finally a simple one for the overall
ir108_deepconvection composite. So if you replace your
ir108_deepconvection enhancement with:
ir108_deepconvection:
standard_name: ir108_deepconvection
operations:
- name: crude_stretch
method: !!python/name:satpy.enhancements.stretch
kwargs:
palettes:
- {stretch: "crude", min_value: 0.0, max_value: 1.0}
Then it should work, but this assumes you have another section defined
for "grey_ir108_clouds" already. Let me know how it goes.
Dave
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Thanasis Karagiannidis
Jan 2, 2022, 3:34:08 AM1/2/22
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Dear Dave and all, Happy New Year!
I didn't think that the background compositor could work that way. I had the impression that it only works with static images as background.
Your solution work just fine, with a small change. In the ir108_deepconvection enhancement I had to replace
kwargs:
palettes:
- {stretch: "crude", min_value: 0.0, max_value: 1.0}
palettes:
- {stretch: "crude", min_value: 0.0, max_value: 1.0}
with
kwargs:
stretch: crude
min_stretch: 0.0
max_stretch: 1.0
stretch: crude
min_stretch: 0.0
max_stretch: 1.0
Thank you very much for your help.
Best regards
Sakis
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David Hoese
Jan 2, 2022, 3:42:18 PM1/2/22
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Glad you got it working. And about the change on the enhancement, sorry
about that. That's what I get for copying and pasting. Let us know if
you have any other issues.
Dave
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about that. That's what I get for copying and pasting. Let us know if
you have any other issues.
Dave
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