minimum spanning network in imsn()

[Haoxi Li]

How can I remove the number of isolates from the minimum spanning network generated by imsn()?
Thanks

[Zhian Kamvar]

Hi,

I'm assuming you mean to remove the number displayed on the nodes? I'm afraid this currently cannot be done in imsn(), but it is possible to do in plot_poppr_msn(). If you use the imsn() function to generate the layout you want, you can go to the "Command" tab and copy + paste the code into an R script. From there, you can add the argument nodelab = 1e6 to the plot_poppr_msn() command, and the numbers should be removed. You can see the manual page for more details:

http://rpackages.ianhowson.com/cran/poppr/man/plot_poppr_msn.html

Best,

Zhian

 

On Aug 22, 2016, at 13:30 , 'Haoxi Li' via poppr <po...@googlegroups.com> wrote:

How can I remove the number of isolates from the minimum spanning network generated by imsn()?
Thanks

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[Haoxi Li]

Thank you very much!