Getting a score per line in the scorefile

[Caterina]

Let's say I have a scoring file with 100 variants like this:

16:22272027:A:G G 1
16:22274136:A:T T 1
16:22716182:T:C C 1
16:22718386:T:G G 1
16:22726428:G:C C 1

...

Is it possible to get the dosage for each variant, so for each of these SNPs a column in the output file? or the only way is creating a single file per variant then merging them on my own? I guess it can also be done with --score-list, but I guess that still needs a single file per variant. 

Thanks for your help!

[Chris Chang]

It sounds like you're looking for "--export A --export-allele <your scoring file> --extract <your scoring file>", not --score.

--
You received this message because you are subscribed to the Google Groups "plink2-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to plink2-users...@googlegroups.com.
To view this discussion visit https://groups.google.com/d/msgid/plink2-users/7f10bb89-831b-4ea1-8cc4-df24611baa0dn%40googlegroups.com.