Adam,
For a batch reactor (i.e., no boundary conditions or source/sinks), only the constraint listed at time zero is applied. You would need to add a source term or a boundary condition to the problem. For the source term, you would also need to solve for flow.
Otherwise, in the case of a batch reactor, you would simply be swapping water when you change the constraint over time, and that is non-physical
Glenn
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Subject: [pflotran-users: 7801] Batch reactor time dependent input flux
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