Payara 4.1.2.172 error during deploy ear

[Omar Brotto]

Failed deploy ear with this errors:
2017-05-23T17:38:54.771+0200|Grave: Exception during cleanup after start failed
org.apache.catalina.LifecycleException: Manager has not yet been started
    at org.apache.catalina.session.StandardManager.stop(StandardManager.java:867)
    at org.apache.catalina.core.StandardContext.stop(StandardContext.java:5735)
    at com.sun.enterprise.web.WebModule.stop(WebModule.java:551)
    at org.apache.catalina.core.StandardContext.start(StandardContext.java:5552)
    at com.sun.enterprise.web.WebModule.start(WebModule.java:522)
    at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:917)
    at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:900)
    at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:684)
    at com.sun.enterprise.web.WebContainer.loadWebModule(WebContainer.java:2057)
    at com.sun.enterprise.web.WebContainer.loadWebModule(WebContainer.java:1703)
    at com.sun.enterprise.web.WebApplication.start(WebApplication.java:107)
    at org.glassfish.internal.data.EngineRef.start(EngineRef.java:122)
    at org.glassfish.internal.data.ModuleInfo.start(ModuleInfo.java:291)
    at org.glassfish.internal.data.ApplicationInfo.start(ApplicationInfo.java:353)
    at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:501)
    at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:220)
    at org.glassfish.deployment.admin.DeployCommand.execute(DeployCommand.java:487)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:539)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:535)
    at java.security.AccessController.doPrivileged(Native Method)
    at javax.security.auth.Subject.doAs(Subject.java:360)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$2.execute(CommandRunnerImpl.java:534)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:565)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:557)
    at java.security.AccessController.doPrivileged(Native Method)
    at javax.security.auth.Subject.doAs(Subject.java:360)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:556)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:1464)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl.access$1300(CommandRunnerImpl.java:109)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1846)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1722)
    at com.sun.enterprise.v3.admin.AdminAdapter.doCommand(AdminAdapter.java:534)
    at com.sun.enterprise.v3.admin.AdminAdapter.onMissingResource(AdminAdapter.java:224)
    at org.glassfish.grizzly.http.server.StaticHttpHandlerBase.service(StaticHttpHandlerBase.java:189)
    at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:466)
    at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:169)
    at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:206)
    at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:180)
    at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:235)
    at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:284)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:201)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:133)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:112)
    at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
    at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:539)
    at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:112)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:117)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:56)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:137)
    at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:593)
    at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:573)
    at java.lang.Thread.run(Thread.java:748)

2017-05-23T17:38:54.772+0200|Grave: ContainerBase.addChild: start:
org.apache.catalina.LifecycleException: java.lang.IllegalStateException: Exception attempting to inject Res-Ref-Env-Property: it.startdigit.pripper.ws.WebServices/ws...@javax.xml.ws.WebServiceContext@ resolved as: jndi: it.startdigit.pripper.ws.WebServices/wsctx@res principal: null@mail: null
No Runtime properties
Database Vendor : null
Create Tables at Deploy : false
Delete Tables at Undeploy : false into class fish.payara.micro.cdi.extension.ClusteredCDIEventBusImpl: Lookup failed for 'java:comp/env/it.startdigit.pripper.ws.WebServices/wsctx' in SerialContext[myEnv={java.naming.factory.initial=com.sun.enterprise.naming.impl.SerialInitContextFactory, java.naming.factory.state=com.sun.corba.ee.impl.presentation.rmi.JNDIStateFactoryImpl, java.naming.factory.url.pkgs=com.sun.enterprise.naming}
    at org.apache.catalina.core.StandardContext.start(StandardContext.java:5556)
    at com.sun.enterprise.web.WebModule.start(WebModule.java:522)
    at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:917)
    at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:900)
    at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:684)
    at com.sun.enterprise.web.WebContainer.loadWebModule(WebContainer.java:2057)
    at com.sun.enterprise.web.WebContainer.loadWebModule(WebContainer.java:1703)
    at com.sun.enterprise.web.WebApplication.start(WebApplication.java:107)
    at org.glassfish.internal.data.EngineRef.start(EngineRef.java:122)
    at org.glassfish.internal.data.ModuleInfo.start(ModuleInfo.java:291)
    at org.glassfish.internal.data.ApplicationInfo.start(ApplicationInfo.java:353)
    at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:501)
    at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:220)
    at org.glassfish.deployment.admin.DeployCommand.execute(DeployCommand.java:487)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:539)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:535)
    at java.security.AccessController.doPrivileged(Native Method)
    at javax.security.auth.Subject.doAs(Subject.java:360)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$2.execute(CommandRunnerImpl.java:534)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:565)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:557)
    at java.security.AccessController.doPrivileged(Native Method)
    at javax.security.auth.Subject.doAs(Subject.java:360)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:556)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:1464)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl.access$1300(CommandRunnerImpl.java:109)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1846)
    at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1722)
    at com.sun.enterprise.v3.admin.AdminAdapter.doCommand(AdminAdapter.java:534)
    at com.sun.enterprise.v3.admin.AdminAdapter.onMissingResource(AdminAdapter.java:224)
    at org.glassfish.grizzly.http.server.StaticHttpHandlerBase.service(StaticHttpHandlerBase.java:189)
    at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:466)
    at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:169)
    at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:206)
    at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:180)
    at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:235)
    at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:284)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:201)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:133)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:112)
    at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
    at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:539)
    at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:112)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:117)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:56)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:137)
    at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:593)
    at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:573)
    at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.IllegalStateException: Exception attempting to inject Res-Ref-Env-Property: it.startdigit.pripper.ws.WebServices/ws...@javax.xml.ws.WebServiceContext@ resolved as: jndi: it.startdigit.pripper.ws.WebServices/wsctx@res principal: null@mail: null
No Runtime properties
Database Vendor : null
Create Tables at Deploy : false
Delete Tables at Undeploy : false into class fish.payara.micro.cdi.extension.ClusteredCDIEventBusImpl: Lookup failed for 'java:comp/env/it.startdigit.pripper.ws.WebServices/wsctx' in SerialContext[myEnv={java.naming.factory.initial=com.sun.enterprise.naming.impl.SerialInitContextFactory, java.naming.factory.state=com.sun.corba.ee.impl.presentation.rmi.JNDIStateFactoryImpl, java.naming.factory.url.pkgs=com.sun.enterprise.naming}
    at org.glassfish.weld.services.InjectionServicesImpl.aroundInject(InjectionServicesImpl.java:176)
    at org.jboss.weld.injection.InjectionContextImpl.run(InjectionContextImpl.java:46)
    at org.jboss.weld.injection.producer.ResourceInjector.inject(ResourceInjector.java:72)
    at org.jboss.weld.injection.producer.BasicInjectionTarget.inject(BasicInjectionTarget.java:117)
    at org.jboss.weld.bean.ManagedBean.create(ManagedBean.java:159)
    at org.jboss.weld.context.AbstractContext.get(AbstractContext.java:96)
    at org.jboss.weld.bean.ContextualInstanceStrategy$DefaultContextualInstanceStrategy.get(ContextualInstanceStrategy.java:100)
    at org.jboss.weld.bean.ContextualInstanceStrategy$ApplicationScopedContextualInstanceStrategy.get(ContextualInstanceStrategy.java:140)
    at org.jboss.weld.bean.ContextualInstance.get(ContextualInstance.java:67)
    at org.jboss.weld.event.ObserverMethodImpl.getReceiver(ObserverMethodImpl.java:329)
    at org.jboss.weld.event.ObserverMethodImpl.getReceiverIfExists(ObserverMethodImpl.java:316)
    at org.jboss.weld.event.ObserverMethodImpl.sendEvent(ObserverMethodImpl.java:274)
    at org.jboss.weld.event.ObserverMethodImpl.notify(ObserverMethodImpl.java:255)
    at org.jboss.weld.event.ObserverNotifier.notifySyncObservers(ObserverNotifier.java:269)
    at org.jboss.weld.event.ObserverNotifier.notify(ObserverNotifier.java:258)
    at org.jboss.weld.event.ObserverNotifier.fireEvent(ObserverNotifier.java:154)
    at org.jboss.weld.servlet.HttpContextLifecycle.fireEventForApplicationScope(HttpContextLifecycle.java:160)
    at org.jboss.weld.servlet.HttpContextLifecycle.contextInitialized(HttpContextLifecycle.java:143)
    at org.jboss.weld.servlet.WeldInitialListener.contextInitialized(WeldInitialListener.java:105)
    at org.apache.catalina.core.StandardContext.contextListenerStart(StandardContext.java:4965)
    at com.sun.enterprise.web.WebModule.contextListenerStart(WebModule.java:574)
    at org.apache.catalina.core.StandardContext.start(StandardContext.java:5534)
    ... 49 more
Caused by: com.sun.enterprise.container.common.spi.util.InjectionException: Exception attempting to inject Res-Ref-Env-Property: it.startdigit.pripper.ws.WebServices/ws...@javax.xml.ws.WebServiceContext@ resolved as: jndi: it.startdigit.pripper.ws.WebServices/wsctx@res principal: null@mail: null
No Runtime properties
Database Vendor : null
Create Tables at Deploy : false
Delete Tables at Undeploy : false into class fish.payara.micro.cdi.extension.ClusteredCDIEventBusImpl: Lookup failed for 'java:comp/env/it.startdigit.pripper.ws.WebServices/wsctx' in SerialContext[myEnv={java.naming.factory.initial=com.sun.enterprise.naming.impl.SerialInitContextFactory, java.naming.factory.state=com.sun.corba.ee.impl.presentation.rmi.JNDIStateFactoryImpl, java.naming.factory.url.pkgs=com.sun.enterprise.naming}
    at com.sun.enterprise.container.common.impl.util.InjectionManagerImpl._inject(InjectionManagerImpl.java:740)
    at com.sun.enterprise.container.common.impl.util.InjectionManagerImpl.inject(InjectionManagerImpl.java:507)
    at com.sun.enterprise.container.common.impl.util.InjectionManagerImpl.injectInstance(InjectionManagerImpl.java:170)
    at org.glassfish.weld.services.InjectionServicesImpl.aroundInject(InjectionServicesImpl.java:166)
    ... 70 more
Caused by: javax.naming.NamingException: Lookup failed for 'java:comp/env/it.startdigit.pripper.ws.WebServices/wsctx' in SerialContext[myEnv={java.naming.factory.initial=com.sun.enterprise.naming.impl.SerialInitContextFactory, java.naming.factory.state=com.sun.corba.ee.impl.presentation.rmi.JNDIStateFactoryImpl, java.naming.factory.url.pkgs=com.sun.enterprise.naming} [Root exception is javax.naming.NameNotFoundException: No object bound to name java:comp/env/it.startdigit.pripper.ws.WebServices/wsctx]
    at com.sun.enterprise.naming.impl.SerialContext.lookup(SerialContext.java:494)
    at com.sun.enterprise.naming.impl.SerialContext.lookup(SerialContext.java:440)
    at javax.naming.InitialContext.lookup(InitialContext.java:417)
    at javax.naming.InitialContext.lookup(InitialContext.java:417)
    at com.sun.enterprise.container.common.impl.util.InjectionManagerImpl._inject(InjectionManagerImpl.java:636)
    ... 73 more
Caused by: javax.naming.NameNotFoundException: No object bound to name java:comp/env/it.startdigit.pripper.ws.WebServices/wsctx
    at com.sun.enterprise.naming.impl.GlassfishNamingManagerImpl.lookup(GlassfishNamingManagerImpl.java:741)
    at com.sun.enterprise.naming.impl.GlassfishNamingManagerImpl.lookup(GlassfishNamingManagerImpl.java:715)
    at com.sun.enterprise.naming.impl.JavaURLContext.lookup(JavaURLContext.java:159)
    at com.sun.enterprise.naming.impl.SerialContext.lookup(SerialContext.java:474)
    ... 77 more

Deploy on 171 and previus version, no error.

[Ondrej Mihályi]

Hi Omar,

The server.log you attached is full of FileNotFoundException errors, like this one:

  PWC6351: In TLD scanning, the supplied resource file:/C:/payara/payara-4.1.2.172/glassfish/domains/domain1/applications/pripper-ear-4.0.0/lib/hk2-core.jar does not exist

java.io.FileNotFoundException: C:\payara\payara-4.1.2.172\glassfish\domains\domain1\applications\pripper-ear-4.0.0\lib\hk2-core.jar (Impossibile trovare il file specificato)

Do you know where it comes from? Can you fix that? I'm almost sure that this is the cause of the problem you described initially - without the missing files, the missing components cannot be deployed.

Ondro

2017-05-26 18:17 GMT+02:00 Omar Brotto <omar...@gmail.com>:

Hi, this is a fresh payara 172 installation.

i've testing to migrate from 171.1 to 172.

deploy same ear.

using domain1

domain.xml configured same previus version

adding all log

2017-05-23 21:30 GMT+02:00 Ondrej Mihályi <ondrej....@gmail.com>:

Hi,

Are you sure these are the only errors you get?

The original exception "NameNotFoundException: No object bound to name java:comp/env/it.startdigit.pripper.ws.WebServices/wsctx" (at the bottom) suggests that your component wsctx has not been found in the JNDI registry. Can you find out why the component isn't there? Any errors related to this?

I suggest to also try deploying to the stock domain in a fresh Payara Server 172 installation, applying all necessary changes (avoid copy&past between domain.xml files). Does that fix the problem?

Ondrej

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[Alban Fonrouge]

Hi,

Did you find a solution or a workaround for Payara 172+?

Thanks,

Alban

[Alban Fonrouge]

This issue can be tracked on github: https://github.com/payara/Payara/issues/2081