Current progress on aligning GAZ to Wikidata

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Chris Mungall

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Jun 5, 2019, 8:43:29 PM6/5/19
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Currently I'm about halfway through GAZ (it takes a while as I launch a separate API query for every GAZ term.. would probably be faster to download all of Wikidata and do locally)

I have what I'm calling high confidence mappings for about 40% of the GAZ terms I see:
https://github.com/cmungall/environments2wikidata/tree/master/matches

These are unambiguous 1:1s (recall that many places in GAZ and Wikidata may share the same name)

I plan to do further processing of these to select ultra-high confidence (using parentage relationships)

This is likely lowballing the actual matches but it's a start, having a set of high confidence sameAs links will be tremendous for both resources, we can propagate geolocations, geonames xrefs, and ENVO classes for most of these!

Pier Luigi Buttigieg

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Jun 6, 2019, 5:55:44 AM6/6/19
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That's really good coverage. With this kind of instance data linked to WikiData, we can start demoing some compelling queries
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