In addition to the extra tube and assorted parts, the 7805 used with the seven digit clocks was swapped out for a switching supply. Now everything is cool to the touch except for the Taylor edge supply, which is just slightly warm. Also, I added a nRF24L01+ RF module and 3.3v supply for it, on the right side of the board, two 4 pin headers for on-board GPS, one for Adafruit, and one for Ublox, and another phone jack to remotely mount the temperature sensor.
The software took much longer to develop than I had anticipated. With Carl's help the clock has the option to receive time from the Mod-6 repeater, in addition to GPS and on-board RTC only options. I thought about having GPS and repeater fall back to each other but that didn't seem to make much sense, so whichever one is selected will fall back to the RTC, with appropriate indicators.
Next I plan to design a four button remote control using ATiny or a similar processor, and another nRF24L01+ transciever, maybe even with some feedback. I'll also work on an eight digit version of the first clock that uses a variety of small tubes, adding RF to that one, too.
After that, I'd like to switch to Atmel Studio. Without the benefit of a debugger, this took far longer than it would have taken, had one been available. At that point I want to switch to a faster, 32 bit processor, as long as the libraries don't cause too many compatibility issues. The 1284P was easy to add, with only a crystal and a couple caps. I'm not sure if the 32 bit processors are as simple to integrate.
That's about it.