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If I am reading your post correctly, you standardized the latent variables but not the observed variables. As a result, the factor loadings (squared) do not represent the proportion of common factor variance. You could have very large unique variance and the variances of the observed variables could exceed unity. In that case, factor loadings that look high compared to standardized loadings may in fact produce a smaller proportion of variance attributable to the common factor.
You did request the standardized output but appear to have deleted it form what you posted. Compare the raw estimates to the factor loading estimates for the fully standardized solution. Also, directly inspect the unique variance estimates.
Also consider, however, that these are very short tests. Reliability comes from errors cancelling out over repeated observations. That process normally takes more than 3 or 4 observations.
I believe that the primary difference between reliability estimates based on raw scores and standardized scores has to do with the relative weight of the items in the total score. If the item variances are homogeneous, then they will be similar. If the are heterogeneous, then the items with larger variances will carry more weight in the estimate based on the raw scores. (However, the same words get recycled with different meanings in different contexts and I am not sure that I interpreted everything as intended in this regard.) However, there is nothing inconsistent about fitting raw scores and then inspecting the standardized solution to evaluate proportions of variance. Generally, the reliability estimate for the scale scores you intend to be used is the appropriate estimate.
Keith