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Hi Adam,You could either look up the corresponding UniRef IDs for those proteins, or use DIAMOND to search your query proteins against HUMAnN2's DIAMOND-formatted UniRef databases and pull out the IDs of the top hits directly.Thanks,Eric
On Wed, Oct 16, 2019 at 11:44 AM adamber1187 <adam.be...@gmail.com> wrote:
Hello all,--This has sort of been hinted to with previous questions, but how do I go about looking for specific genes only for two separate groups? For instance, I'm using metagenomics to look at the relative abundance of a few particular enzymes. Would the BLAST sequences need to be used as a reference for Diamond rather than the Uniref files? Any easy way for that to work?Thanks in advance,Adam
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