GSEAPreranked floating point number parsing error message

[Samyukta Mallick]

Hi, when I run GSEAPreranked on some .rnk files I made, I am running into this new issue that I have not previously seen. 

"[1666252162103] [SEVERE] Could not parse '� � =��Z�MY�b�� �BS���7��ϛ ז��' as a floating point number in row 2 of the data matrix with Name 'PK � � ���!�b�h^ ��� �� � [Content_Types].xml" 

The files are in the same format as all my previous successfully run .rnk files. 

Thank you,

Sam

[Anthony Castanza]

Hello,

Based on the error message text this file is in fact an xml file which we don't support. It would likely need to be re-saved as a plain text format then renamed to have a .rnk extension.

-Anthony

Anthony S. Castanza, PhD
Curator, Molecular Signatures Database
Mesirov Lab, Department of Medicine
University of California, San Diego

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[Samyukta Mallick]

Thank you! I completely forgot that step. It worked now.

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