Fwd: Problems with dSpace 6 installation in Ubuntu 20.04
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Camilo Freire
Nov 13, 2024, 12:25:56 PM11/13/24
to DSpaceCommuni...@googlegroups.com, dspace-c...@googlegroups.com
Hi:
I've install dSpace 6 in Ubuntu 20.04 following these instructions
The instructions are almost the same in all tutorials that I've consulted. Postgres, java 8 where installed via apt-get and Tomcat 9 was installed manually. First running with the user root and then with a tomcat user.
After installing I've an error in all scenarios I got the same error, apparently caused by Solr, this is the exception
2024-11-13 14:06:51,418 INFO org.dspace.browse.BrowseEngine @ anonymous:session_id=7BA363FF882F44B2A19A48FD94FB4E90:ip_addr=127.0.0.1:browse_mini:
2024-11-13 14:06:51,506 ERROR org.dspace.app.webui.components.RecentSubmissionsManager @ caught exception:
org.dspace.browse.BrowseException: org.dspace.discovery.SearchServiceException: Expected mime type application/octet-stream but got text/html. <!doctype html><html lang="es"><head><title>Estado HTTP 404 – No encontrado</title><style type="text/css">body {font-family:Tahoma,Arial,sans-serif;} h1, h2, h3, b {color:white;background-color:#525D76;} h1 {font-size:22px;} h2 {font-size:16px;} h3 {font-size:14px;} p {font-size:12px;} a {color:black;} .line {height:1px;background-color:#525D76;border:none;}</style></head><body><h1>Estado HTTP 404 – No encontrado</h1><hr class="line" /><p><b>Tipo</b> Informe de estado</p><p><b>mensaje</b> El recurso requerido [/solr/search/select] no se encuentra disponible</p><p><b>Descripción</b> El recurso requerido no está disponible.</p><hr class="line" /><h3>Apache Tomcat/9.0.97</h3></body></html>
at org.dspace.browse.SolrBrowseDAO.getSolrResponse(SolrBrowseDAO.java:206)
at org.dspace.browse.SolrBrowseDAO.doQuery(SolrBrowseDAO.java:315)
at org.dspace.browse.BrowseEngine.browseMini(BrowseEngine.java:167)
at org.dspace.app.webui.components.RecentSubmissionsManager.getRecentSubmissions(RecentSubmissionsManager.java:90)
at org.dspace.app.webui.components.RecentSiteSubmissions.process(RecentSiteSubmissions.java:47)
at org.apache.jsp.index_jsp._jspService(index_jsp.java:187)
at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:67)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:623)
at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:466)
at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:376)
at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:324)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:623)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:199)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:144)
at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:51)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:168)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:144)
at org.dspace.utils.servlet.DSpaceWebappServletFilter.doFilter(DSpaceWebappServletFilter.java:78)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:168)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:144)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:168)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:90)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:482)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:130)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:93)
at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:660)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:346)
at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:396)
at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:63)
at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:937)
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1791)
at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:52)
at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1190)
at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659)
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:63)
at java.lang.Thread.run(Thread.java:750)
2024-11-13 14:06:51,506 ERROR org.dspace.app.webui.components.RecentSubmissionsManager @ caught exception:
org.dspace.browse.BrowseException: org.dspace.discovery.SearchServiceException: Expected mime type application/octet-stream but got text/html. <!doctype html><html lang="es"><head><title>Estado HTTP 404 – No encontrado</title><style type="text/css">body {font-family:Tahoma,Arial,sans-serif;} h1, h2, h3, b {color:white;background-color:#525D76;} h1 {font-size:22px;} h2 {font-size:16px;} h3 {font-size:14px;} p {font-size:12px;} a {color:black;} .line {height:1px;background-color:#525D76;border:none;}</style></head><body><h1>Estado HTTP 404 – No encontrado</h1><hr class="line" /><p><b>Tipo</b> Informe de estado</p><p><b>mensaje</b> El recurso requerido [/solr/search/select] no se encuentra disponible</p><p><b>Descripción</b> El recurso requerido no está disponible.</p><hr class="line" /><h3>Apache Tomcat/9.0.97</h3></body></html>
at org.dspace.browse.SolrBrowseDAO.getSolrResponse(SolrBrowseDAO.java:206)
at org.dspace.browse.SolrBrowseDAO.doQuery(SolrBrowseDAO.java:315)
at org.dspace.browse.BrowseEngine.browseMini(BrowseEngine.java:167)
at org.dspace.app.webui.components.RecentSubmissionsManager.getRecentSubmissions(RecentSubmissionsManager.java:90)
at org.dspace.app.webui.components.RecentSiteSubmissions.process(RecentSiteSubmissions.java:47)
at org.apache.jsp.index_jsp._jspService(index_jsp.java:187)
at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:67)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:623)
at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:466)
at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:376)
at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:324)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:623)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:199)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:144)
at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:51)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:168)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:144)
at org.dspace.utils.servlet.DSpaceWebappServletFilter.doFilter(DSpaceWebappServletFilter.java:78)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:168)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:144)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:168)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:90)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:482)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:130)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:93)
at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:660)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:346)
at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:396)
at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:63)
at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:937)
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1791)
at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:52)
at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1190)
at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659)
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:63)
at java.lang.Thread.run(Thread.java:750)
The same occurs if I run the command /dspace/bin/dspace index-discovery -o
As I said, I try to create a user tomcat for running Tomcat 9 and change the ownership of the folder /dspace and their subfoders with no result. Also I change the tomcat.service file adding the line
ReadWritePaths=/dspace
I've copied the folder solr form /dspace/webapps to /opt/tomcat/webapps, however in the web brower If I put http://localhost:8080/solr and 404 Error message is displayed
I've read that the same problem happened to some user in DSpace 5, but the thead with the answer no longer exists
Thank you very much in advance
Camilo Freire
Camilo Freire
Nov 13, 2024, 2:51:51 PM11/13/24
to DSpaceCommuni...@googlegroups.com, dspace-c...@googlegroups.com
Hi again:
in respect with this error, I think that I've found its source: when compiling dSpace
the following error message
appears:
[ERROR] error reading /home/ubuntu-srv-dspace6/.m2/repository/org/restlet/jee/org.restlet/2.1.1/org.restlet-2.1.1.jar; error in opening zip file
[ERROR] error reading /home/ubuntu-srv-dspace6/.m2/repository/org/restlet/jee/org.restlet.ext.servlet/2.1.1/org.restlet.ext.servlet-2.1.1.jar; error in opening zip file
[ERROR] error reading /home/ubuntu-srv-dspace6/.m2/repository/org/restlet/jee/org.restlet/2.1.1/org.restlet-2.1.1.jar; error in opening zip file
[ERROR] error reading /home/ubuntu-srv-dspace6/.m2/repository/org/restlet/jee/org.restlet.ext.servlet/2.1.1/org.restlet.ext.servlet-2.1.1.jar; error in opening zip file
[ERROR] error reading /home/ubuntu-srv-dspace6/.m2/repository/org/restlet/jee/org.restlet.ext.servlet/2.1.1/org.restlet.ext.servlet-2.1.1.jar; error in opening zip file
[ERROR] error reading /home/ubuntu-srv-dspace6/.m2/repository/org/restlet/jee/org.restlet/2.1.1/org.restlet-2.1.1.jar; error in opening zip file
[ERROR] error reading /home/ubuntu-srv-dspace6/.m2/repository/org/restlet/jee/org.restlet.ext.servlet/2.1.1/org.restlet.ext.servlet-2.1.1.jar; error in opening zip file
This is caused because the following repository doesnt exist
[WARNING] Invalid POM for org.restlet.jee:org.restlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet.ext.servlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet.ext.servlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet.ext.servlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet.ext.servlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet.ext.servlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
[WARNING] Invalid POM for org.restlet.jee:org.restlet.ext.servlet:jar:2.1.1, transitive dependencies (if any) will not be available, enable debug logging for more details
The
org.restlet.jee:org.restlet:jar is broken or something like that: when Tomcat tries to execute the .jar the message
"error in opening zip file" appears
I suppose that is possible to fix the problem changing the .pom file or something like that
Thanks in advance
Camilo Freire
DSpace Community
Nov 18, 2024, 12:45:11 PM11/18/24
to DSpace Community
Hi,
I think this was fixed a while ago in DSpace 6.4. See https://github.com/DSpace/DSpace/pull/3275
I think this was fixed a while ago in DSpace 6.4. See https://github.com/DSpace/DSpace/pull/3275
That said, I'd also recommend finding time to upgrade to DSpace 7.x (or later), because DSpace 6 is end-of-life & no longer supported.
Tim
Camilo Freire
Nov 18, 2024, 1:44:10 PM11/18/24
to DSpace Community
Tim, thank you very much. I've continued working in the problem and I find a solution "a lo gaucho", but that solved the issue.
The problem was, as I said in the org.restlet-2.1.1.jar and org.restlet.ext.servlet-2.1.1.jar. probably because of the failing in the download these .jar files. The .jars contained inside html code instead of the executable files. That is probably the cause of the Tomcat error message, which was something like "expected binary code and getting html". I' had a previous Dspace 6.3 installation in Ubuntu 16.04 with the correct .jar files, so I change them both in dSpace/solr and in Tomcat /webapps/solr and all worked fine.
Thank you very much again for helping
Saludos cordiales
Camilo
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