Dear Frank,
I have used the atlas to generate the brain region automatically. But the regions generated were not placed in the right place. The brain looks like a mess. It seemed that the regions generated are oriented to the wrong direction.
This situation happened to eight fib files, but the other two worked well. I tried to use the "Adjust atlas mapping" button, but nothing changed.
In addition, I have only the fib files my teacher gave me. No src, dicom or nifiti files are provided. Could you help me fix the problem?
Thanks!
Jiahui Zhang