Oh! Missed that important point.
So do this happen in ALL of the tools, mind you FD is pretty much everything. What about the Selection tool?
As you know, these tools are basically "built" in db itself insofar as they have subroutines that fire up on load etc... So, I would still be looking to find if the system is slow everywhere, or only when doing certain things like running the s/r as part of FD.
That may assist in isolating if this is an overall issue of just with the tools.
For example, at good 'ol TCL run some big sorts etc and see if d3 itself is having a performance issue.
Like I said before, create and run a really simplistic CRUD form and run that [not within FD, actually run it] etc, and build up concepts of what does and does not work and be affected.
That may give you a clue if the issue is
CPU bound.
Memory Bound
Timeslice bound.
Then that may give you a clue as the likely setting which needs changing.
HTH