Help regarding installation

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Soumyadeep Mondal

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Jul 19, 2024, 10:25:42 AM7/19/24
to Dedalus Users
Hello Dedalus community,
I am new to Dedalus and learning it from the examples. I had a problem while installing it on my personal Mac. Can you guys help to get rid of the problem? I have attached a screenshot for your recommendation.

ERROR:

(dedalus3) soumya@macbook-2 ~ % python

Python 3.12.4 | packaged by conda-forge | (main, Jun 17 2024, 10:11:10) [Clang 16.0.6 ] on darwin

Type "help", "copyright", "credits" or "license" for more information.

>>> import dedalus

[macbook-2.local:24532] shmem: mmap: an error occurred while determining whether or not /var/folders/9d/bzrfrxf11nnd8jk8rw9pq6sc0000gn/T//ompi.macbook-2.501/jf.0/1473642496/sm_segment.macbook-2.501.57d60000.0 could be created.


Screenshot 2024-07-19 at 7.53.46 PM.png

张斌

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Jul 19, 2024, 10:25:01 PM7/19/24
to Dedalus Users
  I encountered the same problem.  

Keaton Burns

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Aug 19, 2024, 12:57:05 PM8/19/24
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Hello,

The error seems to be stemming from the new version of openmpi. I’m not sure of a real fix, but it seems if you execute serial scripts still using the MPI command (e.g. mpiexec -n 1 python3 dedalus_script.py, the error goes away. I’m not sure of a solution for interactive sessions / notebooks, though.

Best,
-Keaton


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Soumyadeep Mondal

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Sep 6, 2024, 8:33:17 AM9/6/24
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Thank you, Keaton. The Problem is now fixed.

Best,
Soumyadeep

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