Add harvesting client fail

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Michel Bamouni

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Aug 16, 2018, 10:40:35 AM8/16/18
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Hello,

When I try to add zenodo(https://zenodo.org/oai2d) as harvesting client , I get the error : "Invalid URL. Failed to establish connection and receive a valid server response."
In the glassfish server logs, I see the following detail : "metadataformats: failed;Failed to execute listmetadataformats; No valid response received from the OAI server."
When I run the request to get zenodo oai provider metadata (https://zenodo.org/oai2d?verb=ListMetadataFormats), it works fine.

For information, in find the zenode oai base url in zenodo developers web site : http://developers.zenodo.org/#oai-pmh

Best regards,

Michel

Philip Durbin

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Aug 16, 2018, 11:14:16 AM8/16/18
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I *think* I got a bit farther with the following config as seen from http://localhost:8080/api/harvest/clients/zenodo but it still doesn't work. Once I click the "run" button on the harvesting client I created I get (over and over) "Failed to find a global identifier in the OAI_DC XML record" from line 229 of ImportGenericServiceBean.java (I'm on c53ef2a on the "develop" branch). I'm not sure anyone has ever using Dataverse to harvest from Zenodo's OAI-PMH server. Maybe I'm doing something wrong but it's non-obvious to me how to fix it. Can you please create an issue at https://github.com/IQSS/dataverse/issues about this?

Thanks!

Phil

p.s. The config I tried:


{
  "status": "OK",
  "data": {
    "nickName": "Zenodo",
    "dataverseAlias": "zenodo",
    "type": "oai",
    "harvestUrl": "https://zenodo.org/oai2d",
    "archiveUrl": "https://zenodo.org",
    "archiveDescription": "This Dataset is harvested from our partners. Clicking the link will take you directly to the archival source of the data.",
    "metadataFormat": "oai_dc",
    "set": "user-zenodo",
    "schedule": "none",
    "status": "inProgress",
    "lastHarvest": "Thu Aug 16 10:59:14 EDT 2018",
    "lastResult": "INPROGRESS",
    "lastSuccessful": "N/A",
    "lastNonEmpty": "N/A",
    "lastDatasetsHarvested": "N/A",
    "lastDatasetsDeleted": "N/A",
    "lastDatasetsFailed": "N/A"
  }
}

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Condon, Kevin M

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Aug 16, 2018, 11:21:39 AM8/16/18
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Does having a stylesheet in the response pose a problem?



From: dataverse...@googlegroups.com <dataverse...@googlegroups.com> on behalf of Philip Durbin <philip...@harvard.edu>
Sent: Thursday, August 16, 2018 11:14 AM
To: dataverse...@googlegroups.com
Subject: Re: [Dataverse-Users] Add harvesting client fail
 
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Michel Bamouni

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Aug 16, 2018, 11:26:20 AM8/16/18
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Hi Phil,

If understand well, it's possible de configure a harvesting clients by using a config file. If true, How I can see the documentation for this?

Michel
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Philip Durbin

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Aug 16, 2018, 11:41:38 AM8/16/18
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I created that harvesting client using the GUI and only used the API call I mentioned to get a "dump" of the config from the database. From looking at the code it does seem to be possible to create harvesting clients using the API ( https://github.com/IQSS/dataverse/blob/v4.9.2/src/main/java/edu/harvard/iq/dataverse/api/HarvestingClients.java#L145 ) but I can't find any documentation for it. If you'd like some documentation for this, please create a separate GitHub issue for this.

Thanks!

Phil


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Michel Bamouni

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Aug 16, 2018, 11:50:15 AM8/16/18
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Ok I undestand.

You say that you successfully create zenodo Harvesting but But my issue is that I can't create this client on my dataverse.
I get the erreor "Invalid Url" like in the joined pictures. So Does you meet this error ?
Michel
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Philip Durbin

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Aug 16, 2018, 12:03:05 PM8/16/18
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Huh. I don't get that error. I'm able to click "Next" and then the Glassfish server.log says this: "8 metadata formats total"

I'm not sure why you're seeing something different and I can't remember if we fixed a bug in this part of the code recently. Again, I'm basically running code that's a little bit ahead of Dataverse 4.9.2, which was recently released.

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Jamie Jamison

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Aug 17, 2018, 4:01:56 PM8/17/18
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I get the same error with 4.9.2

dataverse-metadata-harvesting-error.png

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Philip Durbin

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Aug 17, 2018, 4:12:36 PM8/17/18
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Well, https://dataverse.harvard.edu/dataverse/ssda_ucla is not what "Server URL" is expecting. It's expecting https://dataverse.harvard.edu/oai instead.


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Jamie Jamison

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Aug 17, 2018, 4:20:13 PM8/17/18
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Thank you - yet another beginner mistake!
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Philip Durbin

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Aug 17, 2018, 4:27:09 PM8/17/18
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No worries. You may be interested in this "List of Dataverse installation OAI-PMH (Harvesting) URLs and sets" spreadsheet: https://docs.google.com/spreadsheets/d/12cxymvXCqP_kCsLKXQD32go79HBWZ1vU_tdG4kvP5S8/edit?usp=sharing

These are installations of Dataverse that have indicated that they are happy to let people harvest from them.


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steven.f...@gmail.com

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Sep 10, 2018, 10:31:33 AM9/10/18
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Hi Philip,

I get the same message as you for "https://zenodo.org/oai2d" on dataverse 4.8.6 and 4.9.1 in the server logs:

"Failed to find a global identifier in the OAI_DC XML record"

Could you solve the problem? Should we create a new issue on github?

thank you very much


Le jeudi 16 août 2018 17:14:16 UTC+2, Philip Durbin a écrit :
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Philip Durbin

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Sep 10, 2018, 5:18:31 PM9/10/18
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Hi Steven,

No, I don't have a fix for the problem. Yes, please do create an issue at https://github.com/IQSS/dataverse/issues when you get a chance.

Thanks!

Phil

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Philip Durbin

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Sep 14, 2018, 4:49:18 PM9/14/18
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Thanks for creating https://github.com/IQSS/dataverse/issues/5050 about this.

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