MGG

[Monica Colitti]

hello,

is there anyone who has used MGG to perform the microbetag workflow and visualise networks annotated with microbetags? I tried with the sample files provided but several errors occurred like Sending data to server status code: 500 and others like FlashWeave failed to build your co-occurence network

Thank you in advance for your help

Monica

[Christopher Churas]

Hi,

Sorry for the late reply. I have not had a chance to try this tool. Have you tried reaching out to the developers?

Looks like they have a matrix channel:
https://microbetag.readthedocs.io/en/latest/welcome.html#contact

chris

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[Christopher Churas]

Hi,

One more follow up. I ran one of the tutorials and also ran into the 500 error. I emailed the app developers noted on this page:

https://apps.cytoscape.org/apps/mgg

chris

On Fri, Jun 13, 2025 at 8:43 AM Monica Colitti <colitti...@gmail.com> wrote:

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[Monica Colitti]

I talked with the developer and finally I got the network with a lot of difficulties, primarily defining IDs. However with my data I had no interesting results and this is very strange because I have a lot of data. I show you in attachment the network I produced. It was very hard  for me to understand how to organize the file, Haris helps me.

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[Haris Zafeiropoulos]

Hi ,

Thanks for your interest on microbetag and Monica thanks for going for it!

Since our app is still only in its early stages, we truly value any feedback (matrix, github issues) — especially on how we can improve the clarity of our documentation or make the app more user-friendly.

@Chris apologies for the late reply, it was just bad timing since we were moving to a new version and had some issues with our server, it should be fine now.

@Monica, about the annotations you got, it's not about the amount of data you have; we could discuss this further any time, especially in case you were expecting for something you did not get.

Thanks again and have a nice weekend!

Haris

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