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Hi Scooter,Thank you so much for your kind response.I have a set of ~20 reactions.The rate law expression of each reaction is in a separate SBML file.Before I load in cytoscape,should I merge all the individual SBML files into a single file?
Or, can I import all the SBML files into cytoscape and later define the sequence in which the reactions occur ?
Thanks again,Deepa
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On Thu, Jul 6, 2017 at 9:19 PM, Scooter Morris <sco...@cgl.ucsf.edu> wrote:
Hi Deepa,--
Certainly! I would suggest starting with reading the SBML in directly. You can use the built-in SBML reader, or cy3sbml, which is much more advanced.
-- scooter
On Wednesday, July 5, 2017 at 11:39:55 PM UTC-7, Deepa Maheshvare wrote:Hello Everyone,I would like to visualize a set of reactions in the form of a network/pathway.I have the set of reactions in SBML format.Is it possible to view this as a pathway map on cytoscape?
Thanks a lot for your time and kind consideration.
Deepa
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