Hi Christen,Got it, thanks so much for explaining how that works.Just last quick question - if collecting calibration data isn't an option (no longer at the field site / no longer have access to the equipment), would thinning the data to remove those sub-minute data points help or is that just masking the problem?Thanks!BethOn Fri, May 13, 2022 at 5:07 PM Christen Fleming <chris.h...@gmail.com> wrote:Hi Bethany,fast=TRUE is an approximation of fast=FALSE, so if fast=FALSE is working well, then I would stick with that. fast=FALSE does not require or use the dt argument.If you were to run with fast=TRUE, then you would want to identify and use that ~2:30 sampling interval.If you've already run a bunch with fast=TRUE, then it would have probably been good as long as automated dt came out to be a divisor of that ~2:30 sampling interval. The default setting isn't the median.The weights would probably help with the density estimation for that kind of data, but the speed estimates will only correspond to the active time periods.You could consider collecting some calibration data in a representable environment(s) and using that to fix the errors. You just need something reasonable to take care of those few sub-minute data points.Best,ChrisOn Fri, May 13, 2022 at 11:38 AM Bethany Smith <betha...@gmail.com> wrote:Hi Christen,Thanks so much for getting back to me. I've tried the fast=FALSE, PC='direct' method and they are now running much, much quicker. Would you say if that's running quick enough now that I can ignore the option to manually set dt? I've plotted out all of the time intervals and can see that mostly the median is falling on the most common time interval (e.g. HD04_Sheep below), but not always (e.g. SB06_Mustata below). Is this still OK?Also, if I've previously run some with fast=TRUE, would you recommend re-running all of these again with the fast=FALSE, PC='direct' method, or are they all comparable still? I have compared some of the estimates from each method and they are almost identical, but just wanted to check.With regards to the duty cycling of the tags recording less frequently when the animal is stationary compared to moving, is this going to be a problem? Are there ways to deal with this sort of data? I am using commercially-available pet trackers, so I don't have much control over the fix interval or the data I can download. I was hoping that upweighting the fixes with greater temporal spacing would reflect that the animal is spending longer in that area because they are stationary.This also links to the issue I have with the error in that I don't get any measure of the error for each fix in the data I can download. I did, however, ask the company to provide me with an average error over the tracking time, which is usually around 50m, but I don't have anything more detailed than that so I'm not sure how useful this would be if I'm just applying the same error to each point?Thanks again, I really appreciate your help!Beth
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Hi Christen,Thanks so much for getting back to me. I've tried the fast=FALSE, PC='direct' method and they are now running much, much quicker. Would you say if that's running quick enough now that I can ignore the option to manually set dt? I've plotted out all of the time intervals and can see that mostly the median is falling on the most common time interval (e.g. HD04_Sheep below), but not always (e.g. SB06_Mustata below). Is this still OK?Also, if I've previously run some with fast=TRUE, would you recommend re-running all of these again with the fast=FALSE, PC='direct' method, or are they all comparable still? I have compared some of the estimates from each method and they are almost identical, but just wanted to check.With regards to the duty cycling of the tags recording less frequently when the animal is stationary compared to moving, is this going to be a problem? Are there ways to deal with this sort of data? I am using commercially-available pet trackers, so I don't have much control over the fix interval or the data I can download. I was hoping that upweighting the fixes with greater temporal spacing would reflect that the animal is spending longer in that area because they are stationary.This also links to the issue I have with the error in that I don't get any measure of the error for each fix in the data I can download. I did, however, ask the company to provide me with an average error over the tracking time, which is usually around 50m, but I don't have anything more detailed than that so I'm not sure how useful this would be if I'm just applying the same error to each point?Thanks again, I really appreciate your help!Beth
On Thu, May 12, 2022 at 6:33 PM Christen Fleming <chris.h...@gmail.com> wrote: