The output nicely shows that the atoms 13 to 24 have not moved. At the very beginning cp2k prints the coordinates:
13 1 Au 79 0.000000 0.000000 4.817700 11.00 196.9666
14 1 Au 79 1.475065 2.554888 4.817700 11.00 196.9666
15 1 Au 79 2.950130 0.000000 4.817700 11.00 196.9666
16 1 Au 79 4.425195 2.554888 4.817700 11.00 196.9666
17 1 Au 79 2.950100 1.703241 2.408700 11.00 196.9666
18 1 Au 79 4.425165 4.258129 2.408700 11.00 196.9666
19 1 Au 79 5.900230 1.703241 2.408700 11.00 196.9666
20 1 Au 79 7.375295 4.258129 2.408700 11.00 196.9666
21 1 Au 79 1.475095 0.851646 0.000000 11.00 196.9666
22 1 Au 79 2.950160 3.406534 0.000000 11.00 196.9666
23 1 Au 79 4.425225 0.851646 0.000000 11.00 196.9666
24 1 Au 79 5.900290 3.406534 0.000000 11.00 196.9666
This is precisely what you get in
GOLD_GEO_OPT-pos-1.xyz:
Au 0.0000000000 0.0000000000 4.
8177000000 Au 1.4750650000 2.5548875245 4.
8177000000 Au 2.9501300000 0.0000000000 4.
8177000000 Au 4.4251950000 2.5548875245 4.
8177000000 Au 2.9501004987
1.7032413171 2.
4087000000 Au 4.4251654987 4.2581288415 2.
4087000000 Au 5.
9002304987 1.7032413171 2.
4087000000 Au 7.3752954987 4.2581288415 2.
4087000000 Au 1.4750945013 0.8516462074 0.0000000000
Au 2.9501595013 3.
4065337319 0.0000000000
Au 4.
4252245013 0.8516462074 0.0000000000
Cheers,
Fabian