Diffusion Coefficient

66 views
Skip to first unread message

Raghvender

unread,
Apr 21, 2020, 4:58:43 PM4/21/20
to cp2k
Hi everyone,
I am trying to simulate TeO2 amorphous system at 1000K with 180 atoms (60 Te). So, the way I did was to generate a random configuration followed by 5ps of the run at 300K. Then I did the same for 600K. After that I increased the temperature to 1000K. 
So, my problem is I have already simulated my system for 70ps but still, the diffusion coefficient I am getting is of order of (10e-6). I want this to be order of (10e-5). How can I get that?? 
I am using RINGS code to calculate the diffusion coefficient.
Thanks

Thomas Kühne

unread,
Apr 22, 2020, 4:51:12 AM4/22/20
to 'Dorothea Golze' via cp2k
Dear Raghvendar, 

without full input file and units it’s hard 
to give any potentially useful advise. 

Cheers, 
Thomas

--
You received this message because you are subscribed to the Google Groups "cp2k" group.
To unsubscribe from this group and stop receiving emails from it, send an email to cp2k+uns...@googlegroups.com.
To view this discussion on the web visit https://groups.google.com/d/msgid/cp2k/45222bb6-0148-4502-8a4a-3943d9643174%40googlegroups.com.

==============================
Thomas D. Kühne
Dynamics of Condensed Matter
Chair of Theoretical Chemistry
University of Paderborn
Warburger Str. 100
D-33098 Paderborn
Germany

Nicholas Winner

unread,
Apr 22, 2020, 2:44:33 PM4/22/20
to cp2k
This could be a problem with how you ran your simulation, but it could equally be a problem with your calculation/interpretation of diffusion coefficient. You'll need to provide more info. Consider these while you provide more info.

(1) Are you sure you are getting enough sampling? How is the ergodicity of this system? Perhaps look at (a) energy vs. simulation time, (b) your MSD plots, (c) the velocity autocorrelation function
(2) How is the the diffusion coefficient that you "want" acquired? Is it from simulation or experiment? If its from simulation, make sure every setting is the same and try to match it before you start customizing your input. If its from experiment, then a difference of that order is very understandable. Experimental diffusion coefficients can be very inaccurate depending on the nature of the system or the type of measurement, and even when the experiment is very carefully performed, it can still be different from theory.
(3) What sort of statistically sampling are you using to extract the diffusion coefficient? 
Reply all
Reply to author
Forward
0 new messages