HIV to PDB

[Kelly McGuire]

I was wondering how to convert the HIV CellPack structure to a PDB? 

[Graham Johnson]

Hi Kelly, 

it would create a massive PDB file, with tons of redundant information. What would be your goal with converting it to a PDF file? If you want to set up an all atoms simulation for example, or build a massive PDBx file, you could write a script to parse one of the hiv.apr files to read the PDB file for each ingredient and concatenation them together. Chimera may have the ability to do this- I can try to look into it later this month after we finish some other projects here.

Cheers, Graham

Sent from my iPad

On May 3, 2018, at 7:36 PM, Kelly McGuire <mcg0...@gmail.com> wrote:

I was wondering how to convert the HIV CellPack structure to a PDB? 

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