Question on configuring default columns in cBioPortal

[Setlem, Rohit, M.S.]

Hi Team,

 

We are currently using a local cBioPortal instance and wanted to check if there are any custom configuration settings available. Specifically, we’d like to have certain columns (e.g., variant_classification and clinvar_significance) display by default.

 

I haven’t found a way to enable this through the web interface. Could you advise if there’s a way to configure this in our instance?

Thanks,

 

Rohit Setlem | Senior Bioinformatician | Quantitative Health Sciences | Email: setlem...@mayo.edu

Mayo Clinic | 200 First Street SW | Rochester, MN 55905 | www.mayoclinic.org

 

 

[Prasanna Jagannathan]

Hi Rohit,

Thanks for the email. Currently the option is to display only default columns. However if you can customize the cbioportal frontend code, then it is possible to change the default columns that appear.

The frontend code repo is https://github.com/cBioPortal/cbioportal-frontend

It is possible to fork the codebase and customize it.

Please reply only to the cBioPortal group email.

thanks

Jag

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