Dear Sir,
This is Kouji Maruyama, Ph.D. working at Shizuoka Cancer Center Research Institute.
I would like to use the data from TCGA PanCancer Atlas Studies including 32 studies of 10967 samples.
Can I ask you about the specific or formal name for the data?
I appreciate your kind coordination.
Thank you.
Best regards,
Kouji Maruyama, Ph.D.
Experimental Animal Facility
Shizuoka Cancer Center Research Institute
TEL: +81 55 989 5222 (EXT 6250)
FAX: +81 55 989 6085
Dear Maruyama,
Thank you for your question. The dataset is formally referred to as the TCGA Pan-Cancer Atlas (PanCanAtlas). In cBioPortal, these are listed as “TCGA PanCancer Atlas Studies” (32 studies, ~10,967 samples). The original data is here. The publications are here.
For citation, please include the required acknowledgment: The results published here are in whole or part based upon data generated by the TCGA Research Network: https://www.cancer.gov/tcga
For citing cBioPortal itself, please refer to:
https://docs.cbioportal.org/user-guide/faq/#how-do-i-cite-the-cbioportal
Please let me know if you have any other questions or concerns.
Best regards,
Jessica
Jessica Singh - Schedule a Meeting with me
Solutions Consultant - Genomics and Target Discovery Team
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