Error in getBM(c(seqType, type), filters = c(type, "upstream_flank"), :
Query ERROR: caught BioMart::Exception::Database: Error during query execution: Disk full (/mnt/mysqltmp/#sql_73d3_0.MAI); waiting for someone to free some space... (errno: 28 "No space left on device")
here is my code
seq=getSequence(id=gene2ensemble$Ensembl_gene_identifier,type='ensembl_gene_id',seqType = 'coding_gene_flank',upstream = 200,mart = ensembl)
the id are a list of ensemble ids.
Please help me solve this problem.
Thanks in advance.
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